Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0776 ATGCAGATCTTTGTCAAGACTCTAACGGGAAAGACCATTACCCTTGAGGTCGAGAGCTCTGATACGATCGATAATGTCAAGGCCAAGATTCAGGATAAGGAAGGGATTCCTTCTGACCAACAAAGACTCATCTTCGCCGGTAAACAACTCGAGGATGGTCGCACCCTTGCTGATTACAACATTCAAAAAGAATCTACCCTGCACTTGGTTCTGCGACTCCGTGGTGGTATGCAAATTTTTGTGAAGACTCTGACAGGGAAGCCCATAACTTTGGAAGTTGAAAGTTCTGATACTATAGATAATGTAAAGGCTAAGATACAGGACAAGGAGGGTATCCCTCCTGATCAGCAGAGGCTTATCTTCGCTGGGAAGCAGCTGGAAGATGGACGTACCCTTGCTGATTATAACATTCAAAAGGAGTCCACACTGCACTTGGTTATGCGACTTCGCGGCGGGATGCAAATTTTTGTCAAGATATACAATTGA 486 0.4486 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKPITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVMRLRGGMQIFVKIYN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0776 161 SUPERFAMILY Ubiquitin-like 76 152 IPR029071 -
Lele09g0776 161 SMART ubq_7 77 148 IPR000626 GO:0005515
Lele09g0776 161 SMART ubq_7 1 72 IPR000626 GO:0005515
Lele09g0776 161 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Lele09g0776 161 PANTHER UBIQUITIN 77 158 - -
Lele09g0776 161 ProSitePatterns Ubiquitin domain signature. 103 128 IPR019954 -
Lele09g0776 161 ProSiteProfiles Ubiquitin domain profile. 77 152 IPR000626 GO:0005515
Lele09g0776 161 Pfam Ubiquitin family 79 150 IPR000626 GO:0005515
Lele09g0776 161 Pfam Ubiquitin family 3 74 IPR000626 GO:0005515
Lele09g0776 161 Gene3D - 77 159 - -
Lele09g0776 161 Gene3D - 1 76 - -
Lele09g0776 161 CDD Ubl_ubiquitin 77 152 - -
Lele09g0776 161 FunFam Polyubiquitin 3 1 76 - -
Lele09g0776 161 CDD Ubl_ubiquitin 1 76 - -
Lele09g0776 161 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Lele09g0776 161 FunFam Polyubiquitin 3 77 152 - -
Lele09g0776 161 PRINTS Ubiquitin signature 11 31 IPR019956 -
Lele09g0776 161 PRINTS Ubiquitin signature 53 74 IPR019956 -
Lele09g0776 161 PRINTS Ubiquitin signature 32 52 IPR019956 -
Lele09g0776 161 SUPERFAMILY Ubiquitin-like 1 76 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0776 Lele-ChrLele09 6088252 6088737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0776 1 77 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 97.403 3.07e-49 153