Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0771 ATGGGAAAGCAAAGCATGTTTCAATATGCAGATAAGTTGGACAAGTTGTTAATGTTGTTTGGGACGTTGGGAAGTTTTGGAGATGGGATTCAAACTCCTCTTATGATGTTCATTCTTAGCGATGTGATAAATGCATATGGACATCCAAATGCCGTTTTGACAAAGCATGACGTAAATAAGTATGCTTTAAGGCTTTTCTATGCTGCAATTGGAGTTGGTCTCTCAGCTTTTGTTGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAAACTTCTAGAATGAGAATGGAATACCTGAAATCAGTACTTCGACAAGAAGTCGGTTTCTTCGATACTCAGGCGGCAGGTTCTTCAACAACTTACCAAGTTGTCTCCCTCATTACAGCTGATGCCAACTCTATTCAAGATGTTTTAAGTGAAAAGATACCAAACTTCCTGGCCAGCATGTCGACATTTCTATGCTGCCACATCTTTGCACTTGTACTATCATGGAGGCTTACATTAGCAGCCATGCCACTCTCGGTCATGTTCATAGTTCCAGCACTTATATTTGGGAAGATCATGTTGGATCTAGCAATGAAAATGATTGAATCTTACGGCGTGGCAGGTGGGATTGCAGAACAAGCAATATCTTCAGTAAGAACTGTTTATTCATATGTGGGGGAGAATCAAACACTGAACAGATTTAGCAGTGCGCTTGAGAAAACTATGGAATTGGGAATAAAGCAAGGCTTTGCAAAGGGACTGATGTTAGGAAGCCTAGGAGTTATATATATCAGTTGGGGTTTTCAGGCTTGGGTTGGAACTTTCTTGATCACTGAGAAAGGAGAACAAGGTGGCCACGTATTCGTAGCCGGCTTCAATGTTCTCATGGGAGGCCTGAGTGTCTTAAGCGCGCTTCCCCATTTGACTGCAATCACAGAGGCAACGGCGGCTGTGACGCGTCTATTTGAAATGATTGATAGGGTGCCAAGTATAGATTCTGAGGACAAAAAGGGAAAAGCCTTATCACATGTGAGAGGAGAAATTGCATTCCAAGATGTTTACTTTTGTTACCCATCAAGGCCAGATACAGCAGTTTTACAAGGACTCAATCTTAGGATTCCAGCAGGCAAGAGAATAGGTCTTGTTGGCGGTAGCGGTTCAGGCAAATCCACCATCATTGCATTGCTTGAGAGGTTTTATGACCCTATTGAGGGAGAAATACTCTTAGATGGCCATAAGATCAACAGACTTCAGTTAAAATGGTTGAGATCTCAACTTGGCCTTGTAAATCAAGAACCTGTTCTTTTTGCCACAACCATAAAAGATAACATATTGTTTGGAAAGGAAGGAGCCACCATGGAAAGCGCGATAACCGCGGCTAAAGAAGCAAACGCGCACGATTTCATTGTCAAGTTACCAGATGGATATGAAACTCAAGTTGGGCAGTTTGGATTTCAACTGTCTGGTGGGCAAAAGCAAAGAATTGCCATAGCAAGGGCTTTACTTAGGGATCCGAAGGTTCTGCTGCTTGATGAAGCTACCAGTGCACTAGATGCACAATCTGAAAGAGTGGTACAAGCAGCCATTGATCAAGCTTCAAAAGGAAGAACTACAATCATTATCGCTCACCGTTTGTCCACTATACAATCTGCTCACATTATAGCAGTTCTTCAAGCAGGGAGAGTGATTGAATCAGGTACTCATAATGAGCTCATGCAAATGAATAATGGACAAGGTGGTGAATATTCAAGGATGGTGAAGTTGCAGCAAGTAACGACAACACAAGATGAAGATTCCAAAACTTCAAATCTTCAAACCGAGGGAAGAAATCCTCGCCACAAGATGGGCACTCCACCAAGCCCGGCGAGTATCATCAGATCAAGCACACCGGGAACTCCAGTTTTATTTCCATTCAGTCAGCCATTTTCCATGGGGACACCTTATTCCTACTCAGTTCAATATGATCCTGATGATGATAGTTATGAAAATAACTTCAAAAGATCGACCTATCCAGCTCCTTCGCAGTGGCGTTTGCTAAAGATGAATGCCCCTGAGTGGGGAAGAGCAATGCTGGGATGCTTGGGTGCAATAGGCTCAGGAGCTGTACAACCAGTAAATGCATTTTTTGTTGGAACACTTATCTCTGTCTATTTTGACAGTGAAACCTCAAATATCAAGTCCAACACTAGAGGCCTGGCTCTTACTTTCCTAGGAATTGGTGTTTTTAACTTCCTTACGAGTATTCTTCAACACTACAGTTTCGCTGTTATGGGAGAAAGATTGACCAAAAGAATTCGAGAAAAATTACTAGGAAAATTGTTGACTTTTGAGATAGGTTGGTTTGATGATGAAGACAACACAAGTGCAGCCATTTGTTCAAGATTAGCCTCTGAAGCTAACATGGTTCGCTCGCTCGTTGGAGATCGTTTGTCATTATTGTCCCAAGCAATTTTTGGATCTATCTTTGCTTATGCTCTTGCATTGGTGCTCTCATGGAGATTATCCCTTGTGATGATTGCAGTACAGCCATTAGTGGTTGGAAGCTTTTATTCAAGAAGTGTCTTGATGAAGTCTATGGCAGAAAAAGCGCGAAAAGCTCAAAAGGAAGGAAGCCAACTGGCAAGTGAATCTGTAATAAACCATAGAACCATAACAGCCTTCAGTTCTCAGAAAAGAATGTTGGCCCTCTTCAAATCTACATTGGTAGGTCCTCAAAAGGAGAGCATTAGGCAGTCATGGATTTCCGGTTTCGGTCTTTTCAGCTCGCAATTCTTCAACACTGCAGCAACATCTTTAGCTTACTGGTATGGTGGCAGGCTCTTAGTTGATGGGCTCATAAAACCAAAGCATCTTTTTCAAGCATTCTTCATCTTGCTCTTCACTGCATATATCATTGCAGAAGCTGGAAGCATGACTTCTGACTTATCTAAAGGAAGCAACGCGGTTCGATCAGTGTTTGAAATCTTGGACAGGAAAAGTGAGATCGATCCCGAGACCCCGTGGGCCGTAGACATAAAGAAGAAATTAAGAGGTAGAGTGGAACTTAGAAGTGTTTTCTTTGCATATCCAACAAGACCAGAGCAGATGATTTTTAAGGGTCTATGTCTTAAAGTTGAAGCAGGAAGAACAGTGGCATTAGTGGGACAAAGTGGCTCTGGCAAATCAACTATTATTGGACTTCTTGAAAGATTTTATGAACCATTGAAGGGGACAATATGCATAGATGAACAAGACATTAGGTCCTACAACTTGAGAATATTAAGGTCACATATTGCCCTTGTAAGTCAGGAACCAACCCTTTTTGCTGGAACCATTAGAGAAAACATTGCCTATGGGAAAGAAAAAGCTTATGAAGCTGAGATCAAAAAGGCTGCAACTTTGGCTAATGCCCATGAATTCATAAGTGGAATGAATGATGGGTATGACACATATTGTGGAGAAAGAGGGGTTCAATTATCAGGAGGACAAAAACAAAGGATAGCATTAGCACGTGCGATATTGAAGAATCCTGCAATTTTGTTGTTGGACGAGGCAACAAGTGCACTTGATAGTGTATCAGAGAACTTGGTTCAAGAAGCGTTGGAGAAGATGATGGTTGGAAGAACATGCATAGTTGTGGCTCACAGGCTATCGACCATACAGAAATCAAATTCTATTGCTGTGATTAAGGATGGGAAAGTTGTGGAACAAGGTTCACATAATGAACTAATGTCTCTTGGACGAGATGGAGCTTACTATTCTCTTGTTAAGCTTCAAAATGGCAGATCTTAA 3756 0.4177 MGKQSMFQYADKLDKLLMLFGTLGSFGDGIQTPLMMFILSDVINAYGHPNAVLTKHDVNKYALRLFYAAIGVGLSAFVEGMCWARTAERQTSRMRMEYLKSVLRQEVGFFDTQAAGSSTTYQVVSLITADANSIQDVLSEKIPNFLASMSTFLCCHIFALVLSWRLTLAAMPLSVMFIVPALIFGKIMLDLAMKMIESYGVAGGIAEQAISSVRTVYSYVGENQTLNRFSSALEKTMELGIKQGFAKGLMLGSLGVIYISWGFQAWVGTFLITEKGEQGGHVFVAGFNVLMGGLSVLSALPHLTAITEATAAVTRLFEMIDRVPSIDSEDKKGKALSHVRGEIAFQDVYFCYPSRPDTAVLQGLNLRIPAGKRIGLVGGSGSGKSTIIALLERFYDPIEGEILLDGHKINRLQLKWLRSQLGLVNQEPVLFATTIKDNILFGKEGATMESAITAAKEANAHDFIVKLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQAAIDQASKGRTTIIIAHRLSTIQSAHIIAVLQAGRVIESGTHNELMQMNNGQGGEYSRMVKLQQVTTTQDEDSKTSNLQTEGRNPRHKMGTPPSPASIIRSSTPGTPVLFPFSQPFSMGTPYSYSVQYDPDDDSYENNFKRSTYPAPSQWRLLKMNAPEWGRAMLGCLGAIGSGAVQPVNAFFVGTLISVYFDSETSNIKSNTRGLALTFLGIGVFNFLTSILQHYSFAVMGERLTKRIREKLLGKLLTFEIGWFDDEDNTSAAICSRLASEANMVRSLVGDRLSLLSQAIFGSIFAYALALVLSWRLSLVMIAVQPLVVGSFYSRSVLMKSMAEKARKAQKEGSQLASESVINHRTITAFSSQKRMLALFKSTLVGPQKESIRQSWISGFGLFSSQFFNTAATSLAYWYGGRLLVDGLIKPKHLFQAFFILLFTAYIIAEAGSMTSDLSKGSNAVRSVFEILDRKSEIDPETPWAVDIKKKLRGRVELRSVFFAYPTRPEQMIFKGLCLKVEAGRTVALVGQSGSGKSTIIGLLERFYEPLKGTICIDEQDIRSYNLRILRSHIALVSQEPTLFAGTIRENIAYGKEKAYEAEIKKAATLANAHEFISGMNDGYDTYCGERGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSVSENLVQEALEKMMVGRTCIVVAHRLSTIQKSNSIAVIKDGKVVEQGSHNELMSLGRDGAYYSLVKLQNGRS 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0771 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 343 579 IPR003439 GO:0005524
Lele09g0771 1251 Gene3D - 996 1250 IPR027417 -
Lele09g0771 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 972 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele09g0771 1251 SMART AAA_5 370 562 IPR003593 -
Lele09g0771 1251 SMART AAA_5 1035 1228 IPR003593 -
Lele09g0771 1251 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524
Lele09g0771 1251 CDD ABC_MTABC3_MDL1_MDL2 1008 1247 - -
Lele09g0771 1251 CDD ABC_MTABC3_MDL1_MDL2 343 584 - -
Lele09g0771 1251 Pfam ABC transporter transmembrane region 686 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele09g0771 1251 Pfam ABC transporter transmembrane region 19 293 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele09g0771 1251 FunFam ABC transporter B family member 4 998 1251 - -
Lele09g0771 1251 Pfam ABC transporter 361 510 IPR003439 GO:0005524
Lele09g0771 1251 CDD ABC_6TM_Pgp_ABCB1_D1_like 18 316 - -
Lele09g0771 1251 ProSitePatterns ABC transporters family signature. 482 496 IPR017871 GO:0005524|GO:0016887
Lele09g0771 1251 FunFam ABC transporter B family member 4 333 592 - -
Lele09g0771 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1003 1247 IPR027417 -
Lele09g0771 1251 Gene3D ABC transporter type 1, transmembrane domain 65 914 IPR036640 GO:0005524|GO:0016020
Lele09g0771 1251 Gene3D - 341 597 IPR027417 -
Lele09g0771 1251 SUPERFAMILY ABC transporter transmembrane region 6 327 IPR036640 GO:0005524|GO:0016020
Lele09g0771 1251 MobiDBLite consensus disorder prediction 586 605 - -
Lele09g0771 1251 CDD ABC_6TM_Pgp_ABCB1_D2_like 674 990 - -
Lele09g0771 1251 MobiDBLite consensus disorder prediction 586 615 - -
Lele09g0771 1251 FunFam ABC transporter B family member 15-like 6 342 - -
Lele09g0771 1251 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Lele09g0771 1251 SUPERFAMILY ABC transporter transmembrane region 671 992 IPR036640 GO:0005524|GO:0016020
Lele09g0771 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 584 IPR027417 -
Lele09g0771 1251 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 19 308 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele09g0771 1251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1244 IPR003439 GO:0005524
Lele09g0771 1251 FunFam Putative ABC transporter B family member 8 647 995 - -
Lele09g0771 1251 PANTHER ABC TRANSPORTER B FAMILY 5 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0771 Lele-ChrLele09 6062711 6068267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0771 4 1247 Calmodulin-binding Proteins AT2G36910 43.349 0.0 1004