LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele09g0764	ATGGCAATTCAACGAATTTTGAGTGTTGTAACGGTCAGCTTTTGCGTTCTTTTGTTTCTTCTTCTTACTTCAGCGGGTAACTTGAAAGAAAGGGAAGAATCACGAACAGACTTCCTTAGCCAGCTACTCGATCCGTCATCCGGATTGTTGTTCGATGATAACACGGCAGCACAGTTATGGTCCTCATGCTGGGTGGATTTGATTCAGTTAAAGGAAGAGGTAGAAGATCTTGCCGTATGGTTACCGCAAGAATCATCCGGTAGCACTGATGAAAATTTAGACATTCGATATATGTTGAGAGAAAACATCCAAAAATTGATTAATGCACACCATCCACAGTTAAAGCAAGCTTTTCTTCATTGTTTGAGACAGAATGATCTACCAATCCGTGTCTCTGGAGAAGAGGCTGATTCTAAGACATGGCATGCCTCGTTTATAGAATCAATGTTTTCCAGATCCAGCGTTCTTAGAAGAAATTTGGCTCAGGAACTTCCTCAACACATATTAGTAGCACCTAGCACAGGTCCTGCAGTTATGTCACCAGCTCCTAGTCCAGTGCCATCACCTGAGCTGGCTCCATCACCTTCCATCTCTCAAGTTCCTAAATCCGGTCGTCCTTCTTCATCGCTTCAAACTCCATTCTTCCGACAGCTGGAGCCTCCAGCTATTGGGGATACCACTGCACAGCCATCTTCAGATGCTGATATACAGGCAGACAAGAAAAGTAATCATAAAAGAACAGTTGTTCTTGCCATAGTAATAACTGCTCTCGTGACATTTGTAATTGCAGCACTACTATTTTTATGCTGCAGTAGATATAGGAGTGGTCGACGTAAACAAAATGATGAGAGGCCCCTTCTCAACTTGAGCATGAGCGACTACTCTATTGCCTCTTCCCATTATACTTTTGGAAATTCAGTGAAAGAGGAGAAACTTGGGTTTCAGTCATCAACTAATTACACTGGTGACCACAAAAAGATGTCATCTGTGAATGCCAATTCCCATGTTAGCTCCAATAGTTTCCATACCACAGTGCAGGAAGCTCAATCAATAGCAGCTGTCGGTGTTGCTGCTGGATCATCAATTGAACAGAGACATCCTCCTGGGAGGGAGGGAACCACCACTTCTGGATTGCCTACTCTAAAACCTCCTCCTGGGAGGGCAGGAACCACCACTTCTGTATTGCCTCCTCTAAAACCTCCTCCTGGGAGGGCAGGAACCACCACTTCTGGATTGCCTCCTCTAAAACCTCCTCCTGGCAGACTGCACCCTCTTCCCCCTGAACCACCTTTTAGAGCTGATAATGCTGCTCCTCCTCCTCCACCTCCACCTCCTGCACCTTCACAACCTGTGAAATCTCACTCTGATGCTGGTGGGGATCCAACTCCAGGACCTCCTCCACCTCCTGCACCCCCACAGCCTGTGAAACATCATTCTAGTGTCGGGGGAGCTCCACCTCCTGGACCTCCACCACCACCAGTTCCACCTGGTGCCCGACCAGGTGTTCGTCAACCACCACCTCCTCCTCCAAAGGGTGGTATAGCTCCTCCACGACCTCCTCCACCTAGTGGTCCAAAGATAGCACAGCGAAAGTCTCCACAGAATGCAGGAGCTGGTTCAGAAGGTGAAGCCCATGCTCCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTCCAAGCCAACTCAGATCATTCAATGGTCTGGAATCAGATTAAATCGGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGCTATAGTAATGTGGATAAACACAAAGGTGAACCAAAGAAAGAGTCATCATCTCAAGACCCTTCAACTCAGTATATCCAGATAATTGACAGGAAAAGAGCACAAAATTTGTTGATTTTGCTGCGAGCCTTGAACATCTCAACAGAAGAAGTTTGTGATGCACTTCATGACGGAAATGAGCTTCCCTCAGAATTTCTGCAAACCTTGCTGAAGATGGCACCAACATCCGACGAAGAACTTAAGCTTAGACTTTTCAGTGGTGAAATATCCCAACTTGGGCCTGCAGACCGATTCATAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGAGTACTTTTCAAGAGGATCTCGCTGCCACTAAGGAGTCCTTAGCAACTTTAGAGGTTGCATGTACGGAGCTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGTACATATCGTGGTGGTGCACAAGCATTTAAACTTGATACACTACTGAAATTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTACACTTCGTAGTCCAAGAGATAGTCCGCTCTGAGGGCAAAAGAGCTGCTCGACTGGAAAAAGAAAAGCAGAGTTCCTCTGGTATTAAAAAAGATGGCCGTCTTGAAGATGCATCTGATGAAACTGAGGAACACTATCACGATCTTGGTCTTCAGGTGGTTTCACATTTGAGCAGCGAACTGGACAATGTTAAGAAAGCAGCAGCTATTGATGCTGATAGCTTAACGGGAACTGCTGCCAAACTTGGCCAGGGTGTCCTTAAAATCAGAAATTTTGTGAACAGTGACTTGAAGAGCATAGAGGAAGATAGACAATTTTGTCAGGCAGTGAAGGGTTTTGAGCAGGATGCTGAGAATGATGTCACTAGTCTTCTGGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAGCACCGGTGATTATTTTCACGGGAAAGCAGGGAAAGATGAAGGATCGCGGTTGTTTGTGATCGTACGGGACTTCTTGATGATGTTAGATAAGGTGTGTAAGGAAGTGAAAGACGCCCCAAAGATACCAAAAGCTCAAAAGCAAGAGACACCTAAAGCATCTTCTGATGTTCGTTCACAACCTGATTTTCGCCAGCTGCTATTTCCAGCAATTGCAGATAGGCGGGTGAAAGACGATAGTTCAGACGATGAGGATGAACCTTGA	3018	0.4526	MAIQRILSVVTVSFCVLLFLLLTSAGNLKEREESRTDFLSQLLDPSSGLLFDDNTAAQLWSSCWVDLIQLKEEVEDLAVWLPQESSGSTDENLDIRYMLRENIQKLINAHHPQLKQAFLHCLRQNDLPIRVSGEEADSKTWHASFIESMFSRSSVLRRNLAQELPQHILVAPSTGPAVMSPAPSPVPSPELAPSPSISQVPKSGRPSSSLQTPFFRQLEPPAIGDTTAQPSSDADIQADKKSNHKRTVVLAIVITALVTFVIAALLFLCCSRYRSGRRKQNDERPLLNLSMSDYSIASSHYTFGNSVKEEKLGFQSSTNYTGDHKKMSSVNANSHVSSNSFHTTVQEAQSIAAVGVAAGSSIEQRHPPGREGTTTSGLPTLKPPPGRAGTTTSVLPPLKPPPGRAGTTTSGLPPLKPPPGRLHPLPPEPPFRADNAAPPPPPPPPAPSQPVKSHSDAGGDPTPGPPPPPAPPQPVKHHSSVGGAPPPGPPPPPVPPGARPGVRQPPPPPPKGGIAPPRPPPPSGPKIAQRKSPQNAGAGSEGEAHAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYSNVDKHKGEPKKESSSQDPSTQYIQIIDRKRAQNLLILLRALNISTEEVCDALHDGNELPSEFLQTLLKMAPTSDEELKLRLFSGEISQLGPADRFIKALVDIPFAFKRMEALLFMSTFQEDLAATKESLATLEVACTELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAARLEKEKQSSSGIKKDGRLEDASDETEEHYHDLGLQVVSHLSSELDNVKKAAAIDADSLTGTAAKLGQGVLKIRNFVNSDLKSIEEDRQFCQAVKGFEQDAENDVTSLLEEEKKIMALVKSTGDYFHGKAGKDEGSRLFVIVRDFLMMLDKVCKEVKDAPKIPKAQKQETPKASSDVRSQPDFRQLLFPAIADRRVKDDSSDDEDEP	1005

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	195	215	-	-
	Lele09g0764	1005	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	541	973	IPR015425	-
	Lele09g0764	1005	Pfam	Formin Homology 2 Domain	543	947	IPR015425	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	175	240	-	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	357	547	-	-
	Lele09g0764	1005	PANTHER	FORMIN-RELATED	22	999	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	460	475	-	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	483	527	-	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	798	824	-	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	178	194	-	-
	Lele09g0764	1005	Gene3D	Formin, FH2 domain	546	979	IPR042201	-
	Lele09g0764	1005	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	505	962	-	-
	Lele09g0764	1005	SMART	it6_source	541	962	IPR015425	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	412	450	-	-
	Lele09g0764	1005	MobiDBLite	consensus disorder prediction	958	982	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele09g0764	Lele-ChrLele09	6007745	6012760	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele09g0764	525	977	FH2 protein (formin) Gene Family	AT5G67470	46.104	2.73e-117	380

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele09g0764	09	6007745	6012760	Lele09g0764	09	6007745	6012760	ECH
	Lele09g0764	09	6007745	6012760	Lele11g0767	11	7737148	7742123	hybridization
	Lele09g0764	09	6007745	6012760	Lele12g0571	12	14158847	14162934	hybridization