Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0762 ATGCCAACGGTTTGGTTCTCTCTCAAAAAGTCTCTACACTGCAAATCAGAGCCATCAGAAGTTCATGACCCGAAATCCAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGCTGGTAGGTCTGGGTGTTCGAGGAGTATAGCAAATCTCAAAGATGTGATCCATGGAAGCAAAAGGCATCTCGAGAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTTCTCAACCCAATAACCCACGAAGTGATTTTAAGTAACTCAAGGTGTGAGCTTAAAATCACTGGCTTTGGAGGATTTCAAGATGGGGTTGGCAGTGGAGGCGGAGCTAACGGCGGTGGAGGTGGTGGTGGTAACAATGGCGGCGTTGGCGGTGGTGGCTCTACCTTTGTGGGTACTTTAAGGCCTGGAACTCCGGGACCTGGAGGACACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACTTCAAACACTGCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGGACTGCTTTGCATGGTGGTGTTGGGCTTCATTCTAGCAATAGAATGTCTCTTGAGACTGATTCTAACGGCTGTTCAACTGTTACTTGTCACAAATGTGGAGAGCAATTTACCAAATGGGAAGCTGCGGAAACTCATCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGCGATTCATCAAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAATCTGAGAATCACTGTGGCCGAATAGAGAGAGTTTTGAAAGTCCACAACATGCAAAAGACACAGGCAAGATTCGAAGAGTACAGAGAAATGGTAAAAATCAAAGCTAGCAAACTCCCAAAGAAACATCCTCGTTGTCTTGCTGATGGGAACGAGCTTTTAAGGTTCTATGGAACAACAGTGTCATGCAATCTTGGTCTCAACGGCTCATCAAGCCTCTGCCTATCAGAAAAATGCCGTGTTTGTCGAATTATCAGAAATGGGTTTTCTGCAAAGAAGGAGCTCAAGGGTGGAATAGGAGTTTTCACAACTTCTACAAGTGGAAGAGCATTTGAATCTATTGAGATCCTTGAAGATGACATTTCAATCAGAAAAGCACTCATTGTTTGCAGAGTAATAGCTGGCAGAGTTCATAGGCCACTGGAGAACATTCAAGAAATGGCAGGCCAAACAGGGTTTGATTCTTTGGCTGGAAAGTTTGGTCTTTATTCAAACATAGAGGAGCTTTATTTGCTCAATCCAAAAGCCCTGCTTCCTTGCTTTGTCGTAATTTGCAAGCCCTGA 1317 0.4427 MPTVWFSLKKSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGSGGGANGGGGGGGNNGGVGGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSNTAPRKSPSPFLLSDKEGTALHGGVGLHSSNRMSLETDSNGCSTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTQARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVSCNLGLNGSSSLCLSEKCRVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEILEDDISIRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKFGLYSNIEELYLLNPKALLPCFVVICKP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0762 438 FunFam C2H2-like zinc finger protein 228 437 - -
Lele09g0762 438 SUPERFAMILY ADP-ribosylation 229 437 - -
Lele09g0762 438 MobiDBLite consensus disorder prediction 113 176 - -
Lele09g0762 438 ProSitePatterns Zinc finger C2H2 type domain signature. 206 227 IPR013087 -
Lele09g0762 438 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 436 - -
Lele09g0762 438 Gene3D - 219 437 - -
Lele09g0762 438 MobiDBLite consensus disorder prediction 152 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0762 Lele-ChrLele09 5993739 5995429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0762 1 438 C2H2 Transcription Factor Family AT5G54630 66.383 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele09g0762 None None None