Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0758 ATGGACTCGAAGCAGCTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCATTCACGCCTTCTTATTCCACCATCCCATCACTACCTACAAGGTTTCTTGGATCCTTGAAATTTGAAACAGGAAACTCACCTAATTCTCCCTTTTCTACTCAATTTGATTCTGATTCTCTCTCTACATTGAGTGACGGTCAGGAGCAGCACGGTTGTGGGGAGATACTTTTTGGTTTCAGCCCTTCTTATAACTCTTCTCTGGAAACTAATTATTACTTAAACAGGTCAATCTTACCTGTGGACCGTCTCCAAGACAGTCTGCATCCATATTTTGCCAGGAGGTCTCTTGCACAGGATGCAAGTCCCAGCCAAAAGATCAGGCACGCTTTGCTGGAGCTAGAGTCTGCTCTGATGGCCCCTGATGATGGTGATGTAGTTACCACATCAAATACTTCTTTGAGTGGGAATAACAGGCCTACAACTTCTGGCCAAAGATATGGTTCTTCGAGCCAGGAGATCCAAGGGACACAATATGTTCAAAGCCAACCATCTTTTTTGACTAGCATTAGGCAGTCAAATGAAGTTGCACACGTAGAGAAGCGTCACAAACTAATGGAGGAAGCATGGCTCCAGGGCTTCCCACCTAGCGATTTAAAAGAATTGTTGATTTCTTGTGCCAAAGCCCTCTCTGAAAACAACATGAAAGTTTTTGATGAGTTGATTGAAAAGGCTAGAAGTGCTGTGTCTATCTGTGGCGAGCCTATCCAGCGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGAAGGAGGCATCAGGAAATAGCATATATCATGCCCTCAGGTGCCGAGAACCTGAAGGCAAAGACCTTCTCTCTTACATGCACATGCTGTATGAGATTTGCCCGTACCTTAAATTTGGTTACATGGCTGCCAATGGGGCCATAGCTGAAGCTTGCAGAAACGAAGACCGCATTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGGAGACACTCCTTCAAGCTCTTGCTGCAAGGCCTGGAGGAGCACCCCATGTCCGGATCACCGGAATCGATGATCCCATTTCTCAATATGCACGTGGTCACAGCCTAGACGCAGTCGGTAAGAAATTGACCGCAATATCGGAGAAATTCGGTATCCTAGTTGAGTTTCATGGAGTACCTGTGTTTGCGCCAGAAGTTACAAAGGACATGCTTGATGTAAGGCTAGGAGAGGCTTTGGCTGTGAACTTTCCCCTGCATCTGCATCACACAGCTGATGAGAGCGTTGATGTGAACAACCCGAGGGATGAACTTCTGAGAATGGTGAAGTCACTTGGTCCCAAGGTGGTCACATTGGTGGAACAGGAATCCAACACAAACACAACGCCATTCTACAACAGGTTCTTAGAAACATTGGACTACTACTTGGCCATGTTCGAGTCAATCGATGACACACTGCCAAGAAATAGCAAGGAGCGGATTAATGTGGAGCAGCATTGCTTGGTGAGGGATATCGTGAACGTCATTGCTTGCGAAGGGAAGGAAAGGATAGAGCGACACGAGCTGCTAGGAAAGTGGAAGTCAAGGTTGACAATGGCCGGATTCCGACAGTATCCATTGAGCTCTTACGTGAATTCTGTGATCAGAAGCCTACTTAGGTACTATTCAGAGCATTATTCGCTGGTGGAGAAGGACGGGGCTATGTTGTTAGGGTGGAAACACAGAAATTTGATATCAGCCTCAGCCTGGAGTTGA 1758 0.4659 MDSKQLFSFSVTGSGIPFTPSYSTIPSLPTRFLGSLKFETGNSPNSPFSTQFDSDSLSTLSDGQEQHGCGEILFGFSPSYNSSLETNYYLNRSILPVDRLQDSLHPYFARRSLAQDASPSQKIRHALLELESALMAPDDGDVVTTSNTSLSGNNRPTTSGQRYGSSSQEIQGTQYVQSQPSFLTSIRQSNEVAHVEKRHKLMEEAWLQGFPPSDLKELLISCAKALSENNMKVFDELIEKARSAVSICGEPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGVQWETLLQALAARPGGAPHVRITGIDDPISQYARGHSLDAVGKKLTAISEKFGILVEFHGVPVFAPEVTKDMLDVRLGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVVTLVEQESNTNTTPFYNRFLETLDYYLAMFESIDDTLPRNSKERINVEQHCLVRDIVNVIACEGKERIERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRYYSEHYSLVEKDGAMLLGWKHRNLISASAWS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0758 585 MobiDBLite consensus disorder prediction 141 167 - -
Lele09g0758 585 ProSiteProfiles GRAS family profile. 206 585 IPR005202 -
Lele09g0758 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 581 IPR005202 -
Lele09g0758 585 Pfam GRAS domain family 215 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0758 Lele-ChrLele09 5964024 5965781 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0758 123 584 GRAS Transcription Factor Family AT5G48150 54.644 5.02e-174 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele09g0758 GRAS 7.3e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0758 09 5964024 5965781 Lele29g0655 29 4090602 4098230 CCT
Lele09g0758 09 5964024 5965781 Lele18g0418 18 2455635 2456790 CCT
Lele09g0758 09 5964024 5965781 Lele19g0436 19 2497703 2498164 CCT
Lele09g0758 09 5964024 5965781 Lele32g0637 32 3977113 3982019 CCT
Lele09g0758 09 5964024 5965781 Lele09g0758 09 5964024 5965781 ECH
Lele09g0758 09 5964024 5965781 Lele11g0761 11 7694910 7696664 hybridization
Lele09g0758 09 5964024 5965781 Lele12g0576 12 14205601 14207361 hybridization