Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0746 ATGGCCATTCTTTCTTTCCTGGCTCTCCTTTTCCTTTCATATGTACTTGTCACTTCTCTTCAAGCTTCCATGGCAGTTGATTCCATCCTTCAGCATAGTTCTCAAATGAATCATAGCATGGGATTAGTGTCCAAAGGTGGAAGGTTTGAACTTGGTTTCTTCAGTCCTGGAAAATCTGGTAAACACTATCTGGGAATCTGGTACAACAACATCCCAATTCAGACAGTAGTTTGGGTGGCAAACAGAGTCAACCCAGTCAACGATTCCTCTTCTGCAACCCTAACATTAAACAACTCAGGTAGTCTTGTCCTCACCCAAAACGAGACTCTGGTTTGGTGCTCAACTCCTCTGAAACAAGTGCAGAATCCGGTAGCGGAGCTCTTAGATTCTGGGAATCTTGTGGTTCGAGATAAGGAAGAAGCAAACCCAGAAACCTATTTGTGGCAAAGTTTCGACTTTCCAACTGACACACTATTACCAGAGATGAAATTAGGATACGACCTACAAACAGGGTTGAATAGGCGTCTCACAGCTTGGAAGAATCTAGAAGATCCATCCCCAGGAGACATCTCTATGACTATAGCACTCAATAATTATCCTGAATTTTATATGATGAGAGGAGATTCAAAAATCTTCAGAACCGGACCATGGAATGGAATACAAAATAGTGGCTCCCCAGAGCTAAAGCCAAATCCTTTGTTCAGTTACACGTTCGTGTCCAACAAAACTGATGTCTACTATTCGTACAGTCTCAAGGATGATTCTTTAATCACAAGATTAACCATGAACCAAACGAATTCTGTTCGTTACCGTTATGTGTGGGCAGAAACTGATAAAACATGGAGGATTTATTCAACAATTCCACAGGATTATTGTGACACTTATGGGTTATGTGGACCAAATGGAAATTGTATTCTTTCTAATTCACCAGTGTGCCAATGCTTGGAAGGTTTCAAACCTAAGTCACCACAGAAATGGAACTCCATAGATTGGGCTGATGGTTGTGTCAGGAAAGTAGAACTGAACTGCGAGGACAAGAAGAAGAAGGTTGGGTTTCTCAGAATGAGTGGGATGAAATTGCCTGATACTACTCATACTTGGCTGGATGAGACAATTGGGTTAGAGGAATGCAGACAAAAGTGTCTGAACAATTGTTCTTGCATGGCCTACTCAAATTCGGATATAAGAGGACAAGGTGGTGGTTGTGCCATGTGGTTTGGAGATTTGGTTGATCTCAGACAGTTTTCTGTTGGGGGACAGGATCTGTTTATTCGAATGGACGCTTCAGAACTAGGCTCACAAAATGAGGGTAGGAAGAAGATGACAATAGCAGTTGCTACCGTTATACCCGTTGTTTTTGGGATGCTGATTTTATTTGGGATATGTTATATCAGAAATGTGAGAAGAAAAATGAATGAGAAACCAAAAAATTTAGGAGTGCAAAATAGTGAAGGGCATGAGGAAGATCTGGACCTCCCCTTGCTTGAGATGTCTGAAATATCTATGGCCACCGATGACTTCTCAATGAAAAAGAAGATTGGAGAAGGTGGCTTTGGACCTGTATACGGGGGAAGATTAGAAAATGGGCAAGAAATTGCAGTGAAAAGGCTTTCAAAAATTTCAGGACAAGGAGTAAATGAGTTCAAGAATGAAGTAAAACTGATTGCAAAACTTCAACACCGAAATCTTGTCAAACTACTTGGATGCTGCATACAGGAGCAAGAGAAAATGCTAGTATATGAATACATGCCTAATGGTAGCCTGGACTCCTTCATATTTGGTAACAACAGAGGTAAAGTACTCAATTGGTCCAAGCGCTTTAGCATTATTTGTGGAATCGCTCGAGGTCTTCTATATCTTCACCAAGATTCTAGATTAAGGATAATTCATAGGGATCTCAAAGCAAGCAACATTTTACTGGATGACGAGATGAATCCCAAAATATCAGATTTTGGATTGGCTAAAACTTTTGGAGGCGACCAAACTGAAGGAAGCACAAATAGAGTAGTGGGGACTTATGGCTACATGTCGCCAGAGTATGCTGCTGACGGGTTATTTTCGATAAAATCTGATGTTTTCAGTTTTGGTGTTTTGTTGCTAGAGATAATAACCGGTAGAAGAAATAAAGGGTTTTATCATGCAGACAATACTAATAACCTTGTTGGTCATGCATGGACACAATGGGAAGAAGGGAGGGTTCTAGAACTCATTGACGAAAATATTGAGGAGTCATGTAATGAAGCAGAAGTATTACGTTGTATACACATTGGTCTTTTGTGTGTTCAACAGAATCCAGAAGACAGACCTACTATGCCAATGGTGGTTCTAATGCTAGGAAGCAATATGGAATTGGCAGAGCCAAAGCAACCTGGTTTTTATGTGAGGAAATTTTCAATTGAAAAGAATTATTCTTCAACTCAGTTAGAATCTGTATCTACTAATGAAATAACAATTTCTCAGCTAGAAGCTCGATAA 2475 0.402 MAILSFLALLFLSYVLVTSLQASMAVDSILQHSSQMNHSMGLVSKGGRFELGFFSPGKSGKHYLGIWYNNIPIQTVVWVANRVNPVNDSSSATLTLNNSGSLVLTQNETLVWCSTPLKQVQNPVAELLDSGNLVVRDKEEANPETYLWQSFDFPTDTLLPEMKLGYDLQTGLNRRLTAWKNLEDPSPGDISMTIALNNYPEFYMMRGDSKIFRTGPWNGIQNSGSPELKPNPLFSYTFVSNKTDVYYSYSLKDDSLITRLTMNQTNSVRYRYVWAETDKTWRIYSTIPQDYCDTYGLCGPNGNCILSNSPVCQCLEGFKPKSPQKWNSIDWADGCVRKVELNCEDKKKKVGFLRMSGMKLPDTTHTWLDETIGLEECRQKCLNNCSCMAYSNSDIRGQGGGCAMWFGDLVDLRQFSVGGQDLFIRMDASELGSQNEGRKKMTIAVATVIPVVFGMLILFGICYIRNVRRKMNEKPKNLGVQNSEGHEEDLDLPLLEMSEISMATDDFSMKKKIGEGGFGPVYGGRLENGQEIAVKRLSKISGQGVNEFKNEVKLIAKLQHRNLVKLLGCCIQEQEKMLVYEYMPNGSLDSFIFGNNRGKVLNWSKRFSIICGIARGLLYLHQDSRLRIIHRDLKASNILLDDEMNPKISDFGLAKTFGGDQTEGSTNRVVGTYGYMSPEYAADGLFSIKSDVFSFGVLLLEIITGRRNKGFYHADNTNNLVGHAWTQWEEGRVLELIDENIEESCNEAEVLRCIHIGLLCVQQNPEDRPTMPMVVLMLGSNMELAEPKQPGFYVRKFSIEKNYSSTQLESVSTNEITISQLEAR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0746 824 SMART serkin_6 507 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0746 824 ProSiteProfiles PAN/Apple domain profile. 343 428 IPR003609 -
Lele09g0746 824 Gene3D Transferase(Phosphotransferase) domain 1 583 790 - -
Lele09g0746 824 Pfam Domain of unknown function (DUF3403) 781 824 IPR021820 GO:0004674
Lele09g0746 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 218 IPR036426 -
Lele09g0746 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lele09g0746 824 CDD STKc_IRAK 513 778 - -
Lele09g0746 824 CDD PAN_AP_plant 339 425 - -
Lele09g0746 824 Pfam Protein tyrosine and serine/threonine kinase 508 775 IPR001245 GO:0004672|GO:0006468
Lele09g0746 824 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Lele09g0746 824 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Lele09g0746 824 Gene3D Phosphorylase Kinase; domain 1 467 582 - -
Lele09g0746 824 Pfam PAN-like domain 346 412 IPR003609 -
Lele09g0746 824 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 769 - -
Lele09g0746 824 SMART ntp_6 347 426 IPR003609 -
Lele09g0746 824 SUPERFAMILY Protein kinase-like (PK-like) 492 796 IPR011009 -
Lele09g0746 824 Gene3D - 22 151 IPR036426 -
Lele09g0746 824 Pfam D-mannose binding lectin 75 180 IPR001480 -
Lele09g0746 824 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Lele09g0746 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 786 - -
Lele09g0746 824 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 151 - -
Lele09g0746 824 FunFam receptor-like serine/threonine-protein kinase SD1-8 480 582 - -
Lele09g0746 824 SMART blect_4 33 154 IPR001480 -
Lele09g0746 824 CDD B_lectin 42 154 IPR001480 -
Lele09g0746 824 ProSiteProfiles Protein kinase domain profile. 507 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0746 824 PIRSF SRK 1 824 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0746 Lele-ChrLele09 5654982 5658363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0746 443 795 Receptor kinase-like Gene Family AT4G23230 53.521 1.93e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele09g0746 PK_Tyr_Ser-Thr 4.9e-53 CL0016