Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0735 ATGGCGGAAGATCAATTTCAAGCCACCGGAAACTGGTTGGACTCAGCTAGAAACTCCACCACCAGGTTCGAAACTGAGGCTTCTCAATCGTCCTCCTCCATCCCCAACTTCGCCTGGCAACATACAGATATGTCGTCGCCGTCGCATGACCTTAAGCCAAGGTCGTCTTCCATGGCGGCTTCACCTTCTTCTTCTGACCTCAACTTGCACATGATGGGTTTAGGCCTCTCTTCCCAACAACCTCTCGACTGGAATGATCAACCCTCCTTTCTTCAAGGTGCAGAGAAAGGTGGAGAGAGCAGTTTCTTGAACCCATCAAGCACGAATTTTCAGCAAGAAAGTGCGATGATGGGGTTGTCTCATCAAGTTCTATGGAGGGATAAGTTGTTTTCTGCGGAGTCATCTTCTTCAACGGACGAGTTCAAACAAGTGAACCGGCCGGGCTTCTCTTTGGATCAAACTCAGTTCAGCCCTCAATATAGTTCTGCGGAAAGTACTGTAACAACCCAACAAGGCTTAGCTTCTAGTACTACTAACTTTCAGATGGATTTGTATGGGAACTCATCCATATTACAAGGATTATTAGGACCTGATCATCATAATAACAATAATCAAGTTCAGTATGATCATCATCATCAGAATCGCCAGATGAACTTCCCATACCAACAATCTTCAAGCTACGGATTGAACAGTAACAATCAGTTAATTCCTTCATGGTCTAAAGTTCCTCAATTTCTCAGAGCTTCACCTCCAAAACAACAACAATCACCTCATCATAATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCAGCTTCTGGGACCTCCAACATTAAAGATGATAGATTTGGCGCTGGCTTCTTTCCTTCTTTGCAACCTCCATTCCCACCTCCAAGCTTCGATGTTCAATCCCAGAATGTGTGTGAAGTTAGGGAGTCGAGTAGCGTGGTGAAGAAAAGTGGGAGCGAGGCGGCAAACAAAAGGCCTCGGAACGAAACTACTCCATCTTCTTTACCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCGCCTTTCGGAAAGACTGATACAGCCTCGGTGCTGTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGTACACCGTATATGAAAAGTGGAGCTCCCATACAGCAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGTGGTGAAGGTAGAGGAAACCAAGATTTGAGAAGCAGAGGGCTATGTCTGGTGCCAGTTTCGAGTACATTTCCAGTGACTCAAGAAACCACAGTTGATTTTTGGACGCCAACCTTCGGAGGAACATTCAGATAA 1383 0.4476 MAEDQFQATGNWLDSARNSTTRFETEASQSSSSIPNFAWQHTDMSSPSHDLKPRSSSMAASPSSSDLNLHMMGLGLSSQQPLDWNDQPSFLQGAEKGGESSFLNPSSTNFQQESAMMGLSHQVLWRDKLFSAESSSSTDEFKQVNRPGFSLDQTQFSPQYSSAESTVTTQQGLASSTTNFQMDLYGNSSILQGLLGPDHHNNNNQVQYDHHHQNRQMNFPYQQSSSYGLNSNNQLIPSWSKVPQFLRASPPKQQQSPHHNNNNQLHFTNNAPFWNAASGTSNIKDDRFGAGFFPSLQPPFPPPSFDVQSQNVCEVRESSSVVKKSGSEAANKRPRNETTPSSLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQQHQQSPGKSKEGGEGRGNQDLRSRGLCLVPVSSTFPVTQETTVDFWTPTFGGTFR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0735 460 MobiDBLite consensus disorder prediction 318 343 - -
Lele09g0735 460 FunFam Transcription factor bHLH123 family 347 410 - -
Lele09g0735 460 MobiDBLite consensus disorder prediction 318 344 - -
Lele09g0735 460 CDD bHLH_AtbHLH_like 343 394 IPR045239 -
Lele09g0735 460 SMART finulus 348 392 IPR011598 GO:0046983
Lele09g0735 460 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 137 441 - -
Lele09g0735 460 Gene3D - 347 409 IPR036638 GO:0046983
Lele09g0735 460 MobiDBLite consensus disorder prediction 1 70 - -
Lele09g0735 460 MobiDBLite consensus disorder prediction 401 426 - -
Lele09g0735 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Lele09g0735 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 404 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0735 Lele-ChrLele09 5570031 5572098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0735 265 460 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.366 4.25e-68 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0735 09 5570031 5572098 Lele09g0735 09 5570031 5572098 ECH
Lele09g0735 09 5570031 5572098 Lele11g0740 11 6998958 7001037 hybridization
Lele09g0735 09 5570031 5572098 Lele12g0595 12 14382745 14386217 hybridization