Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0696 ATGGCAAGCCAAGAGAGTACCAATAATTACATACTTGTCACCTTCATCGTGGAGATTTCATTTCACAAAATCTCGACCCTCTCCTTCTTCTTCTTCAACCGCGTCCTCGCTGTTTCTCTCCTGTATAATCTCAATCACAATAAAGCCAGCATGGGAGTGCCAGAGACCGACCCGCTCGCTCAATTGAGCCTACCTCCGGGTTTTCGGTTTTACCCGACTGACGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAGGTGGCCGGCCACCATTTCTCTCTGCAAATCATTGGCGAAATTGACCTTTACAAATTCGACCCTTGGGTTCTTCCAAGCAAAGCCACTTTTGGCGAGAAAGAATGGTACTTCTTTAGCCCGAGAGACCGAAAGTACCCGAATGGATCCCGACCCAACAGGGTCGCCGGGTCTGGATACTGGAAAGCCACCGGAACCGACAAAATCATCACCACCGCTGGTCGGAAGGTTGGCATAAAGAAAGCTCTCGTTTTCTATATTGGAAAAGCACCGAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTCGATTCCTCCCGAAAGAACGGGTCCACCAGGCTCGATGATTGGGTTCTGTGTCGGATTTATAAGAAGAACTCCAGCACCCAGAAGGCAACGCCTATGATGGTTCCGGTCAAAGAATACGAATACAGTAACGGGTCGTCTTCGTCATCGTCGTCCCACTTGGACGAAGTGCTGAAATCTCTGCCAGAAATCGACGATCGGTGTTTCGCGCTGCCACGTGTGAGCTCGCTCAAGACGTGGCAGCAGGAGGAGAAGCTGAATCTTCAGAATCTGAATGGGGGTAATAATTTCGTGGAGTGGGCCAACCCGGCGGTTCTGCACTCGGTGGCGGAGTTCATTTCCGGGAACAATCAAACGCAGACCCAATCTCAATCTCAAGGGATGATGAACTACAGAGCAATGAGCGACGTGCAGCATGTCCCGTCAATCCCTCCGGTGACGGTGCCGGAGGAGGAGGTCCAGAGCGGAGTGAGCAGTTCCGGGTTTTATCAACAGAGTTCAAATGCGTTCACGCAGGGATTCGGCAACTCAATGAATGACCCGTATGGATTCGGATACCCGAATCAGACCATGGGGTACGGGTTCAGACAATGA 1161 0.5125 MASQESTNNYILVTFIVEISFHKISTLSFFFFNRVLAVSLLYNLNHNKASMGVPETDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNGSTRLDDWVLCRIYKKNSSTQKATPMMVPVKEYEYSNGSSSSSSSHLDEVLKSLPEIDDRCFALPRVSSLKTWQQEEKLNLQNLNGGNNFVEWANPAVLHSVAEFISGNNQTQTQSQSQGMMNYRAMSDVQHVPSIPPVTVPEEEVQSGVSSSGFYQQSSNAFTQGFGNSMNDPYGFGYPNQTMGYGFRQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0696 386 Gene3D NAC domain 73 218 IPR036093 GO:0003677|GO:0006355
Lele09g0696 386 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 63 303 - -
Lele09g0696 386 SUPERFAMILY NAC domain 59 212 IPR036093 GO:0003677|GO:0006355
Lele09g0696 386 Pfam No apical meristem (NAM) protein 65 189 IPR003441 GO:0003677|GO:0006355
Lele09g0696 386 FunFam NAC domain-containing protein 72-like 73 217 - -
Lele09g0696 386 ProSiteProfiles NAC domain profile. 64 212 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0696 Lele-ChrLele09 5293079 5295781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0696 51 386 NAC Transcription Factor Family AT4G27410 58.310 2.26e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0696 NAM 2.1e-36 No_clan