Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0662 ATGGCGTCTCCCACATCTCTCAACTTCCCCCTCCTCTTCCTCCTTCTCGCCCTTCTCTCTCTCTCCCATGCTCGTAACTTCTACGTCGGTAACACAGACGGTTGGGTCTTGAACCCCTCTGAGAGTTACAGTCAATGGTCTTCTCGAAACAGATTTCAGGTCAATGACGTTCTCGTGTTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAGCAAGGAGGATTACGACAAGTGTAATACCAAGAACCCTGTCAAGAAGTTTGAAGATGGTGATTCGCAGTTCACGCTTGATCGATCTGGACCTTTCTACTTTATCAGTGGACATGATGGTAATTGTGACAAGGGTCAGAAGTTGATTGTTGTTGTGTTGTCTGTCCGATCATCATCACCGGGAAAGCCGTCACCTGGTACTCCTCCGGGAACTCCCTCTACTCCCAAAGCTCCTTCTCCTTCTGGCGGAGGCACCCCTGGTTCACCTCCAGGATCTCCGGTGACCACTCCTACCGTTCCATCCCCGTCTGGTAACCCTCCGCCGTCCAGCCCGGCATCTCCTTCACCGGGAAATTCTCCCACAGCTCCGTCCACGTCGCCCGTTCCACCATCTCAGGCACCGGGAGGCTCCACGACAACGCCATCTCCGGGGAACAGTCCTCCGGTGGGTACTTCTCCTTCCACGACACCATCTTCGCCGACTATGGCGCCGGCCAATGCACCTGGACAATTATCTCCGGTGGGTAACTCTCCATCCATGACACCCAACGCACCATCTATGGCTCCGGGAGGGTCTCCAATGGGTAATGCTCCATCCATGACACCGAACACACCATCTATGGCTCCGGGAGGATCTCCGACAGGAGCGTCTCCAATGGGCAGTCCTCCGATGGGTTCTGGATCACCGGCGATGTCTCCATCAGCCTTATCTCCAGCTACTTCACCAGTATCATCATCACCTATGGGATCCCCACCGGAACCTACAGGAACCACTCCATCAGGTTCGCCGGCGCCGGGCCCAGCAGGTTCTACAGCACCCTCAGCAAACAACAACTCGACAACGCCGGCTCCATCATCAGCATGGGCTGAAACTGCTCCGAACTTGTTGGGGTATGCAGTTACTATTATGGTCGGTGCTGCTCTCTGTACCATTTTTGGTGCTAAGTAA 1164 0.5464 MASPTSLNFPLLFLLLALLSLSHARNFYVGNTDGWVLNPSESYSQWSSRNRFQVNDVLVFKYQKGSDSVLEVSKEDYDKCNTKNPVKKFEDGDSQFTLDRSGPFYFISGHDGNCDKGQKLIVVVLSVRSSSPGKPSPGTPPGTPSTPKAPSPSGGGTPGSPPGSPVTTPTVPSPSGNPPPSSPASPSPGNSPTAPSTSPVPPSQAPGGSTTTPSPGNSPPVGTSPSTTPSSPTMAPANAPGQLSPVGNSPSMTPNAPSMAPGGSPMGNAPSMTPNTPSMAPGGSPTGASPMGSPPMGSGSPAMSPSALSPATSPVSSSPMGSPPEPTGTTPSGSPAPGPAGSTAPSANNNSTTPAPSSAWAETAPNLLGYAVTIMVGAALCTIFGAK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0662 387 MobiDBLite consensus disorder prediction 154 208 - -
Lele09g0662 387 MobiDBLite consensus disorder prediction 317 333 - -
Lele09g0662 387 MobiDBLite consensus disorder prediction 299 316 - -
Lele09g0662 387 MobiDBLite consensus disorder prediction 334 360 - -
Lele09g0662 387 SUPERFAMILY Cupredoxins 23 125 IPR008972 -
Lele09g0662 387 CDD OsENODL1_like 25 121 IPR041846 -
Lele09g0662 387 MobiDBLite consensus disorder prediction 129 360 - -
Lele09g0662 387 Gene3D - 23 130 IPR008972 -
Lele09g0662 387 MobiDBLite consensus disorder prediction 227 258 - -
Lele09g0662 387 Pfam Plastocyanin-like domain 35 118 IPR003245 GO:0009055
Lele09g0662 387 PRINTS Proline rich extensin signature 138 150 - -
Lele09g0662 387 PRINTS Proline rich extensin signature 179 195 - -
Lele09g0662 387 PRINTS Proline rich extensin signature 158 179 - -
Lele09g0662 387 PRINTS Proline rich extensin signature 198 215 - -
Lele09g0662 387 FunFam Early nodulin-like protein 1 24 129 - -
Lele09g0662 387 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Lele09g0662 387 PANTHER BLUE COPPER PROTEIN 26 199 IPR039391 GO:0009055
Lele09g0662 387 MobiDBLite consensus disorder prediction 268 283 - -
Lele09g0662 387 MobiDBLite consensus disorder prediction 134 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0662 Lele-ChrLele09 5026975 5028278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0662 6 265 Phytocyanin Superfamily AT5G53870 43.233 1.56e-51 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0662 09 5026975 5028278 Lele09g0662 09 5026975 5028278 ECH
Lele09g0662 09 5026975 5028278 Lele11g0676 11 6446530 6447824 hybridization
Lele09g0662 09 5026975 5028278 Lele12g0663 12 14926413 14928005 hybridization