Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0655 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGAGTCAGAGGAGGTAATGGCTGCAAGGTTGGGGACGATAACGGCAGCTTGATGCTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTCTGGAGGAGATGGAAGGAGAGGATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAACTATGGAGAAGGGTGGGTACTGGGTAGGTTGATGGGGAAGGTTGCATCTGATAAGTGCCATAAGTGGGTCTTCAAAGAGCCAACAGAATGTGAACCCAACATCTCCAACTACTGGCAGAGCTCATTTGATGCTCTCCCTTCTGAATGGACCGACCAGTTTAATTCAGGCATTCAGACCATTGCTGTAATTCAAGCTGGCCATGGCCTTCTCCAACTTGGCTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTTCTGAGAATGAGGCATACATTTGAATCTCTGGGGTATCAATCTGGGTTCTACCTCTCACAGCTCTTCTCTTCAACAAGAAACAGCTCGTCTTCGACTTCGCTTCCTTCGAAACCGTCTTCTGCCATGCTGATTCGAGCGCCTCCTCCGCTCTTCAGCTGGGGTCAAACGCCACTGGTAGCTTCGGCTGCAGCAGCTTCAATGCTGTCTTCACCCAATTTTCAACACACAGCGAGAGTCGGAGGGTTCCCGCAGGCGAAAGACGAGACTCATGTATTTCTGATGCCTCATCATCATTCGTCGTCCGATCAACAACCTGCGGCTGCAAGAATGGAAGACATGATGAGGGAGAATGAGAATGACATAAAATGGCCAAATGGGTTGTCCTTCTTCAATGCTCTCACAGGACAAAATGATGATGCTACTAAGCTTTTGTTCAATCCAGAGAGCTTGGATAACAAACCAGACGAAGCCTCGAACCCGAACCCAAACGAGTTCTTGAGCTTGGACAGCCATCACCAGACAGAAAGTGGCAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTCTACCTGCTAGAGTGGCTTCGTCTTCTTCATCGACCTCGATGGATCATCCTCATCATCATCAGCAACAACCACCACCACCTGTGGAATATAGGAATTCTGAAGGAGGTATGTACCCGGATGTCATGGAGACCTTTTTGGAGTAA 1263 0.4869 MVGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEMEGEDPVRKAFSKMSIQLYNYGEGWVLGRLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSLPSKPSSAMLIRAPPPLFSWGQTPLVASAAAASMLSSPNFQHTARVGGFPQAKDETHVFLMPHHHSSSDQQPAAARMEDMMRENENDIKWPNGLSFFNALTGQNDDATKLLFNPESLDNKPDEASNPNPNEFLSLDSHHQTESGRKMDKFKRSFTLPARVASSSSSTSMDHPHHHQQQPPPPVEYRNSEGGMYPDVMETFLE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0655 420 MobiDBLite consensus disorder prediction 330 411 - -
Lele09g0655 420 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 192 IPR025610 -
Lele09g0655 420 MobiDBLite consensus disorder prediction 337 355 - -
Lele09g0655 420 MobiDBLite consensus disorder prediction 356 371 - -
Lele09g0655 420 MobiDBLite consensus disorder prediction 375 392 - -
Lele09g0655 420 PANTHER GB|AAF34833.1 1 420 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0655 Lele-ChrLele09 4992378 4994547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0655 20 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.481 7.68e-20 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0655 09 4992378 4994547 Lele09g0655 09 4992378 4994547 ECH
Lele09g0655 09 4992378 4994547 Lele11g0670 11 6398346 6400259 hybridization
Lele09g0655 09 4992378 4994547 Lele12g0670 12 14972017 14974233 hybridization