Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0644 ATGGAGAATTTCTTCTTGTCATTCCAAAACCAGAAACACCCAGAGAAACACGACAAAAAGAGGCTGACTGAAGATCAAGTGGCCATCCTAGAGAAAAGTTTTGCCTGCAGAAAGAAGCTGGAGGCAGAGCAGAAGTTGCAGCTCTCAAAACAACTGGGTGTGCCACCGAGACAGATCGCGATATGGTACCAGAACAAGCGAGCTCGCTGGAAGACACAGAGTCTTGAGGAAGACTACGGTGCCTTGCAGCTGAAGCTAGAGAATGTGATAGCAGAGAAGAAGCAACTTGAGAGAGATGTTGAAAGGCTCAAGGACGAGTTGAAGGAGGCCAAAGAGATGTTGATCTTCATGAAAGCTGAAGGAGAAGCTCATAACCATAGTTCTATTGCTGAATTTTCATATGATTGTGAAGAATTTGTACAGGTTCAAGAACTTTATGCTTGTTTCATGGCTCCAAATAATTAA 465 0.4366 MENFFLSFQNQKHPEKHDKKRLTEDQVAILEKSFACRKKLEAEQKLQLSKQLGVPPRQIAIWYQNKRARWKTQSLEEDYGALQLKLENVIAEKKQLERDVERLKDELKEAKEMLIFMKAEGEAHNHSSIAEFSYDCEEFVQVQELYACFMAPNN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0644 154 Coils Coil 72 120 - -
Lele09g0644 154 ProSitePatterns 'Homeobox' domain signature. 48 71 IPR017970 GO:0000981|GO:0006355
Lele09g0644 154 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 15 127 IPR045224 GO:0003700
Lele09g0644 154 SUPERFAMILY Homeodomain-like 16 81 IPR009057 -
Lele09g0644 154 CDD homeodomain 19 74 IPR001356 GO:0003677
Lele09g0644 154 SMART HOX_1 15 77 IPR001356 GO:0003677
Lele09g0644 154 Gene3D - 11 80 - -
Lele09g0644 154 ProSiteProfiles 'Homeobox' domain profile. 13 73 IPR001356 GO:0003677
Lele09g0644 154 Pfam Homeodomain 19 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0644 Lele-ChrLele09 4925735 4926199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0644 8 151 Homeobox Transcription Factor Family AT5G53980 46.897 1.41e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele09g0644 Homeodomain 2.1e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0644 09 4925735 4926199 Lele09g0644 09 4925735 4926199 ECH
Lele09g0644 09 4925735 4926199 Lele11g0659 11 6325734 6326051 hybridization