Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0632 ATGCAGTATGCACTTAGCATTATATCAAACAAGTGTAAGTTATTGCGATTTCTGATTTCTCCCCGTCTCTCATTCATTTTCTCAAACACATTACCTGCACTGTGTTTTCGCTCTATCTCTATATTTGGGGTCACATCACATATATTGGAAATGGCACAGTTACCTCCCAAAATACCTAGCATCCCACAAAATTGGCCTTCTTTTCCTCATCACAAGATGTCAGATATAGCTAATTTCAATCCTATTAACACTACTCAACAACAACAATATCATCATCAGCAACAGCAACAAAATTCTTCCCCACCATTATCACAACACTTACCTTCCTGGGTCGACGAATTCCTCGACTTTTCGTCAGCACGGCGTGGTGCTCACCGGCGGTCAGCGAGCGACTCCATCGCGTTCCTCGACGAATGGCGGAGCTCCGGCACTATCGCGGGAGCCCATGGATTCGACAGGTTGGATGAGGAGCAGCTTATGTCGAAGTTCTCCGACGACATTGCCTCCGGTGGCTTCCCTCCAGCGTTGTCGAACCCTTCCACGCCGTCCGATCAAAATAGCAACAATGATGAGAAACCAATGGTATTAGACGAAGCGGTCCCAGTTAAAGAGAATCAACAGCAGCCGCCCCCAAAGAATAGTGAGCAAGGCGAAGTGGGGAGCTCATGCAAAACTGAAAAAGTATCACCACCATCGTCGTCCGTTGCCCCTAGCAGCGTCGAAACCATCGCCGATCCTAAAAGAGTCAAAAGAATACTGGCGAACAGACAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTTCAATACATTTCTGATCTGGAGAAGAGCGTGACGACATTGCAGACGGAGGTATCAGCGTTGTCGCCACGTGTAGCGTTCTTGGACCACCAACGTTTGGTTCTCAACATCGACAATAGTGCATTGAAGCAACGCATTGCAGCTTTGGCCCAAGACAAGATTTTCAAAGATGCACATCAAGAAGCGTTAAAGAAGGAAATAGAGAGACTAAGGCAAGTATATGAGCAACAGAAGCTGCAGAAGAGAGGGAACAACATGAATGGCAAGTCATTGCCCTTTGCTTCTTTTGAGAAGGAGCAGCTCCTCAGTTGA 1110 0.4694 MQYALSIISNKCKLLRFLISPRLSFIFSNTLPALCFRSISIFGVTSHILEMAQLPPKIPSIPQNWPSFPHHKMSDIANFNPINTTQQQQYHHQQQQQNSSPPLSQHLPSWVDEFLDFSSARRGAHRRSASDSIAFLDEWRSSGTIAGAHGFDRLDEEQLMSKFSDDIASGGFPPALSNPSTPSDQNSNNDEKPMVLDEAVPVKENQQQPPPKNSEQGEVGSSCKTEKVSPPSSSVAPSSVETIADPKRVKRILANRQSAQRSRVRKLQYISDLEKSVTTLQTEVSALSPRVAFLDHQRLVLNIDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQVYEQQKLQKRGNNMNGKSLPFASFEKEQLLS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0632 369 MobiDBLite consensus disorder prediction 344 369 - -
Lele09g0632 369 PANTHER BASIC LEUCINE ZIPPER 34 51 353 - -
Lele09g0632 369 MobiDBLite consensus disorder prediction 206 240 - -
Lele09g0632 369 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Lele09g0632 369 MobiDBLite consensus disorder prediction 165 241 - -
Lele09g0632 369 MobiDBLite consensus disorder prediction 174 192 - -
Lele09g0632 369 MobiDBLite consensus disorder prediction 86 105 - -
Lele09g0632 369 Gene3D - 246 299 - -
Lele09g0632 369 FunFam Basic leucine zipper 61 246 319 - -
Lele09g0632 369 SUPERFAMILY Leucine zipper domain 247 301 IPR046347 GO:0003700|GO:0006355
Lele09g0632 369 CDD bZIP_plant_RF2 248 298 IPR044759 GO:0003700|GO:0006355
Lele09g0632 369 SMART brlzneu 243 307 IPR004827 GO:0003700|GO:0006355
Lele09g0632 369 Pfam bZIP transcription factor 247 291 IPR004827 GO:0003700|GO:0006355
Lele09g0632 369 Coils Coil 322 346 - -
Lele09g0632 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 297 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0632 Lele-ChrLele09 4833886 4836967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0632 51 325 bZIP Transcription Factor Family AT3G58120 51.923 9.63e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele09g0632 bZIP_1 3.1e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0632 09 4833886 4836967 Lele09g0632 09 4833886 4836967 ECH
Lele09g0632 09 4833886 4836967 Lele11g0644 11 6237047 6239021 hybridization
Lele09g0632 09 4833886 4836967 Lele12g0692 12 15122494 15127815 hybridization