Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0619 ATGGCTTTGCGTCACTCACTTCTAGAACTCCCTCGTTCCCTTTCTATTTCTATCTTCACTCCCAAACCCGCCCCTCTCAAAAAACGCTCTCTCTCTGTTTCTGCCTCTGCAACAGCTATGTCTTCCACTGCTCGAAAGGTTCTGGTTCCGATTGCCAATGGCACGGAGCCTATGGAGGCTGTGATTACGATCGATGTTCTCCGACGATCGGGAGCTGACGTTACCGTCGCTTCTGCTGGGAAGCAGCTTCGGGTCGAAGCTCTACATGGCGTAAAGATTATTGCTGATGCTCCTGTTTCTGATGTGGCTGATACTGCTTTCGACCTTGTCGCTTTACCTGGTGGTGTTCCAGGTGTGGATAATCTCAGGGACTCTGAAACTTTGGAAACCTTGGTGAAAAAGCACGTTGCAGATGGACGGCTTTATGCTGCAGTATGCGCTGCTCCTGCCGTGGTACTTGGATCATGGGGTTTGCTCAAGGGACTGAAGGCAACTGGCCATCCCTCATTTATGGAAAAACTGGCCTCTCATGCGACTGCTGTTGAATCAATAGTCCAGCTGGATGGAAGAGTTGTGACAAGCCGGGCACCAGGCACTACCATGGACTTTGGCGTTGCACTGGTTGAGCAGTTATATGGAAAGGAGAAGGCCAACGAAGTTGCTGGTCCACTGGTCATGCGATCCAATCATGGGGATGAATATACTTTTACTGAGCTAAACCCAGTCGAATGGACATGTGATAATACCCCCAAGATTCTTGTACCAATTGCTAATGGCACTGAGGAAATGGAAGCTGTCATTATCATTGATGTTCTGCGAAGAGCAAAAGCAAATGTTGTAGTTGCTTCTGTTGATGACAAAGTAGAGATTGTAGCTTCTAGGAACGTTAAACTGGAGGCAGACATGCTCCTTGATGAAGCAGCGAAACTTACATATGACCTAATTGTGCTGCCAGGTGGACTTGGTGGTGCCAAAGCTTTTGCAAAGTCAGAAACTCTGGTTAGTTTGCTGAAAAAGCAGAGAGAGTCAAACAGATATTATGGAGCGATTTGTGCATCCCCTGCATTAGTCTTGGAGCCCCATGGCTTGCTAAAGGGTAAGAAGGCCACTGCCTTTCCTGCCATGTGCAGTAAGTTATCAGATCAGAGCGAAATTGAAAACAGGGTCGTGGTTGACGGCAACCTTATTACCAGCAGAGGACCAGGGACCTCCATGGAGTTTGCATTAACTATCGTGGAAAAGCTATTTGGGCGGAAGTTAGGACTAGAACTTGCAAAAGCGATGGTCTTCACACAACAACGCCTAACAATAATCCAAAGGAAGACCAGTAACTTCAAGTCAACATCCCAAACCAGCAATTCCCCTTCTCTCCATCTCTCTTCTCTTCTGCTACTTGGTTTCCAAAAGTTATCGGAGGATTATAGATTAATATTCGATTATTTACGTCGCAGCACTGGATCGGATCCATTGGAGCCACTGAGTTACTCTGTGATGAGTTGTTTCTCTTGTCTCATCAGAAAAAAGGGATGTGTCTCAGCCACACAACCAACTGAAATTGATCTTGAGGTTTCAGACATTCAGAATGTGAACCTTTACACCTACAAGGAACTTCGAATTGCCACGGAAGGTTTTAGCCCAGCAAACAAGATAGGACAAGGCGGTTTCGGATCTGTCTATAAGGGAAGGCTGAGAAATGGGACTCTTGCCGCTATAAAGGTGTTGTCAGCTGACTCGCATCAAGGGGTTCGGGAATTCCTGACCGAAATCAAGGTGATCACTAGCATAGAGCATGAGAACCTAGTTAAGTTGTTCGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCTTAGCACAAACACTTATTGGTGGAGGGCATAGTAGCATTCAATTCAGTTGGCCTGTGCGGAGGAACATTTGCACAGGTGTTGCCCGGGGCCTAGCATTCCTTCATGAGGAAGTTGAACCACATATTATTCATAGAGACATTAAAGCAAGCAATATACTACTTGATAAAAACCTGCAGCCCAAAATCTCTGATTTTGGTCTCGCAAAGCTTCTTTCTTCAAACCTGACTCATATTAGTACACGTGTTGCTGGAACAGCTGGTTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAAATCAGATGTCTACAGTTTTGGAGTTCTACTATTGGAAATTGTTAGTGGGAGGTGTAACACAAACCGAAGGTTACCTGCTGAAGAACATTATCTTCTTCCAAAGGCATGGACGATGTATGAAAATGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGACGACTTCAATGTTGAGGAGGCATGCCGGTTTTGTAAGATCGGTCTTCTCTGCACTCAAGATTCTCCCCTCCTCCGACCATCAATGTCTTCTGTGCTTGGCATGTTGAAGGGTGAAATTGATATTGATGATAAGAAAATTACAAAACCAGGATTACTATTTGAGTTTGTAGAAGGCAAAGAAGAAAAGATGCAAAAAGCTGAGGCTGAAGTGGAAAATACATCTTCCCTGGGCATCATAGGGAAGCAAGATGATTCCTCTTTGACAGGAACCACTGCCTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAAGCGATTAA 2664 0.4527 MALRHSLLELPRSLSISIFTPKPAPLKKRSLSVSASATAMSSTARKVLVPIANGTEPMEAVITIDVLRRSGADVTVASAGKQLRVEALHGVKIIADAPVSDVADTAFDLVALPGGVPGVDNLRDSETLETLVKKHVADGRLYAAVCAAPAVVLGSWGLLKGLKATGHPSFMEKLASHATAVESIVQLDGRVVTSRAPGTTMDFGVALVEQLYGKEKANEVAGPLVMRSNHGDEYTFTELNPVEWTCDNTPKILVPIANGTEEMEAVIIIDVLRRAKANVVVASVDDKVEIVASRNVKLEADMLLDEAAKLTYDLIVLPGGLGGAKAFAKSETLVSLLKKQRESNRYYGAICASPALVLEPHGLLKGKKATAFPAMCSKLSDQSEIENRVVVDGNLITSRGPGTSMEFALTIVEKLFGRKLGLELAKAMVFTQQRLTIIQRKTSNFKSTSQTSNSPSLHLSSLLLLGFQKLSEDYRLIFDYLRRSTGSDPLEPLSYSVMSCFSCLIRKKGCVSATQPTEIDLEVSDIQNVNLYTYKELRIATEGFSPANKIGQGGFGSVYKGRLRNGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSSIQFSWPVRRNICTGVARGLAFLHEEVEPHIIHRDIKASNILLDKNLQPKISDFGLAKLLSSNLTHISTRVAGTAGYLAPEYAIRSQVTRKSDVYSFGVLLLEIVSGRCNTNRRLPAEEHYLLPKAWTMYENGELEKLVDALLEDDFNVEEACRFCKIGLLCTQDSPLLRPSMSSVLGMLKGEIDIDDKKITKPGLLFEFVEGKEEKMQKAEAEVENTSSLGIIGKQDDSSLTGTTASFATMTFTSIYDRSD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0619 887 FunFam cold-responsive protein kinase 1 515 619 - -
Lele09g0619 887 FunFam Protein DJ-1 homolog C 244 433 - -
Lele09g0619 887 Pfam Protein kinase domain 547 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0619 887 CDD STKc_IRAK 550 817 - -
Lele09g0619 887 FunFam Protein DJ-1 homolog C 39 229 - -
Lele09g0619 887 SUPERFAMILY Class I glutamine amidotransferase-like 250 432 IPR029062 -
Lele09g0619 887 FunFam Putative LRR receptor-like serine/threonine-protein kinase 620 827 - -
Lele09g0619 887 ProSiteProfiles Protein kinase domain profile. 544 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0619 887 TIGRFAM not_thiJ: DJ-1 family protein 251 425 IPR006287 -
Lele09g0619 887 TIGRFAM not_thiJ: DJ-1 family protein 46 222 IPR006287 -
Lele09g0619 887 Gene3D - 37 237 IPR029062 -
Lele09g0619 887 Gene3D - 245 443 IPR029062 -
Lele09g0619 887 Pfam DJ-1/PfpI family 251 413 IPR002818 -
Lele09g0619 887 Pfam DJ-1/PfpI family 45 210 IPR002818 -
Lele09g0619 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Lele09g0619 887 ProSitePatterns Protein kinases ATP-binding region signature. 550 572 IPR017441 GO:0005524
Lele09g0619 887 SUPERFAMILY Class I glutamine amidotransferase-like 45 228 IPR029062 -
Lele09g0619 887 Coils Coil 836 856 - -
Lele09g0619 887 SMART serkin_6 544 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0619 887 CDD GATase1_DJ-1 47 211 - -
Lele09g0619 887 CDD GATase1_DJ-1 252 415 - -
Lele09g0619 887 Gene3D Phosphorylase Kinase; domain 1 515 619 - -
Lele09g0619 887 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 472 848 - -
Lele09g0619 887 SUPERFAMILY Protein kinase-like (PK-like) 523 815 IPR011009 -
Lele09g0619 887 Gene3D Transferase(Phosphotransferase) domain 1 620 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0619 Lele-ChrLele09 4736964 4745453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0619 532 821 Receptor kinase-like Gene Family AT1G53430 56.207 1.22e-99 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele09g0619 Pkinase 1e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0619 09 4736964 4745453 Lele09g0619 09 4736964 4745453 ECH
Lele09g0619 09 4736964 4745453 Lele11g0632 11 6137644 6145912 hybridization
Lele09g0619 09 4736964 4745453 Lele12g0702 12 15200106 15203465 hybridization