Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0618 ATGTTACAAAACAAAGAAATACAGGATTTATATGATGACAACTTTGAAGGTTCTAATGATGAAAGACGGATTTTTAATGAGGTATTTTTCAGTAAAGACAGTGTTCAGCCTAGTCGGAGGTGTCTTGTTACTGGAGTGATCAACTTTGAATGTGAATCTAGTAAAAACACAAATATTTCACTCTGCTCTAGCAATGAAAGCTCAGTTATAACAAGCCCCTCTTCTTCAAAAGTTACACATTCTGAGGATGATTGTGATGTGATTCAGAATTTGAAAGAGACTGCTCTGGACTGTATGCCTGAAAGATTCAATCATGAAGGCTCAAATCACGAGGATGTAAATGTTAAACGCATGAAATTTTCCCTGCATGAACTTCCCTGTAGTAGATCCAATTCCAAAAAGGCTTTGAGTTCACCGTCACTTTCAAAAGAATATGTTACTGACATGCCTGGTGCTGTTATAGACTTTGATAGTAAACCACTTTCACTTCTTTTATTTGAATCATCAAAGTATGGTGTAATATCCAGTTGCTATCTGTTGAAGCATAGCATCATGCAGAACAAAAGTAGATCTAAGGATGATGTAGATGTTTTAAATTGTACAAAAACCACTGGAGATGAAAATTTGGCCAAAGAAGTGGCTACAAGTAAAGTGGCTGCTTCTCCTGTTTCCCAAGAGAGCTTCGCAAACAAGCTTGTAGTAACAAGTCCATCAAGCACTGCTGTTGAGAAATCTGGATCTCATTTCCAATTTGAGGAGACGCCTAAAGGATTTTTATCCTATGACACGGATAAGTCAAATTTAACATTGACACCAGACCTTAAGAAGGACCCCCGTGATTTATTGCATTACCGCAGTGTGCAGTTGCTTATGATGGCAGGATGGTCTATTGAGAAGCGTAAGAGACCTTGTAGGCGCAACTTTGAGTCAGTCTATAGGACACCAGAAGGAAGGCCAGTTCGTGAATTTATAAAAGCTTGGAGGTTATGTGGTCAGTTTTTGTCTGCTGACACATACAATTCAATGCAGGATAATTGTAAAGAATGGGCTGACATTGGTCAGTTCTGGTCTGATCTAGCCAATGCACTGATAAATGTTGAAAAGGAAATGAACCAGTCAGAGCCTGCTGCTATGCTAGCTTATCAATGGTGTCTCCTGGATCCTTTTGTAGTAGTAATTTTTATTAAAAGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTGAAGGTGACACAAAGTATAGTTTCTAGAAATTATAGGATGGCATGTACTGTCAAAAGTTCAGCTTGGGACTGGGAGGGTACTCCTGCAGCTCCATTTGATCTGAAACATGACTCTGCTACTGCCACTGGGAGCAAACTCACAACGTCTCTGCTCAACTACCATGCCTGTAATCAGAAAACTGGGGGTGGAAATGACTTAGGGTATGAACAGACAATTAGTGGGGTAATAAAACTTCCAATATATGAATGTAATAGTTTTGATAACCAGGAAGAGGTGTACTTAGAGCACAATGCTGACAGCATAGGAAATCAATGTAGGGAAGCGTCTGTGTATGAAAGGAGCAGTCTTGGTGTAGGCTTGTTACCTGATGATGGGTTGGGTTGTACTGGTACACAGTCAAGTGCTTGTACTTCCAATGTTACTACAAATTCTGGAAATTCAAGTCAGGTATTTAGAGGGCTCAAAGTAAACACTTGTCAGGAAAGTAATTTTAGAAATTTTGAAAGCTCTGATGAAAAGTACTCGGAAAATTTGTTGGAAACAAGTAAGAGAGTTGATGGGGATAAGCCAATGGACAAGGCAGAGGAAAAGGATCCATCAGATGGCGAAGTTCAGGATCATTATGGAATTTATCTGCAGGAATCCCTGAATAGATACCCACATGGAGCAAGACGTGGCTTGGTTCATTGTCATGCCTCAGAGGCCTTTCATCAGTCTGAATATGGTGAGGAAGGGGGTGGAAAAAGCTCAAGAGATTGTGTGCTTGAGACGGACAACACATGTTCTACCCCTGATGTTTCTCTGAAAAAGAAGATACGGAGGAAGTGTAAAAGGGTATCTGAAATCAAACTGAGTATGTTATATGAAAGTGACATGATGGGTTCTGCAGTTACAGATGAGGTCCAATTACCAAATGGTGAAGCATGTGGTACTCACTTAGAATTTGAAGAGGGTGAGCATGTAGTTGATAATGCAGAGGATAGAGGAGTCCACAGGAAATTATCATCAATCAGTTCATTCCAGCAACAACATATTGGGAGAACAAATGCAAAGTTTAGAAAGAGTTGTCACAACTATGACCCTATAACTGAAAAACCTAAGTCTAGTGGATGCCAGATTGCAGATGATGACCTGTTGGTTTCAGCTATTCTTAAGAAAACAGGTTTCATCTCAAAGACAACTCAAGGTGAATCTAAATCTAAATGCTGCAAATCAAGAGCTCAGAGAAAGCTGAAAAGGCAAAAGGGTCATTGCAGGTTGCTACCAAGGAACCTTGGCAATGAAGGGAAGCGCATTAGGGAAGGCAAGAGGTGTTATTTTGGGGCAAGAACAGTGCTATCTTGGTTGATTGAGAATGGGATCATATCTATAAATGATGTGATTCAATACCGAAACCTTAAAGATAATACTGCCATTAAGGATGGTAGGATTACCAGGGATGGTATTATATGTAAGTGTTGCAAAAAGTTGCTTACATTATCTGAGTTCAAGTTTCATGCTGGATATAGATTAAATCGCCCCTGCTTGAACCTTTTCATGGAGTCTGGTGAGCCCTTTACTTTGTGCCTGCTTCAAGCTTGGTCTGCTGAATACAAGGCCAGGAAAAGTGGGAATCAAACTGTGAAAGCTGACGATGATGATAAAAATGATGACTCATGTGGATTGTGTGGTGATGGCGGTGAGTTGATATGCTGTGATAACTGTCCATCAGCTTTTCATCTTGCTTGTTTGTCTGCTCAGGATATCCCGGAAGGCAACTGGTACTGCACAAACTGCACTTGTCAGATTTGTGAGAATTTTGTCAATGATAAAGAGGCTCCTGGTGCTCGTGATTCATTGCAATGTTTACAGTGTGAGCATAAATATCATGAAAATTGTCTGAGGGGAGGCAGTAAACCAGAAGGGGAAATTTCTGATGGTTGGTTTTGTAGTGGACGCTGCCAAGAGTTATACTCTGGCCTTCAATCTCGGGTTGGACTTGTTAATCATATTGATGATGGCCTCTCATGGATGCTTCTTAGATGCATCCAAGATGACCAAAAGGTTCATTCTGCCCAGTGGTTTGCCCTCAAGGCGCTATGCAATACAAAATTAACCGTTGCCCTTACCATCATGGGGGAGTGCTTTTTGTCAATGGTGGATCCTAGAACAGGCATAGACATGATACCCCATGTTTTATACAATCGGGGGTCTGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACTGTGGTATTGGAGAAGAAAGATGTCTTAATTTCTGTAGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCACTTATTGCAACTTGCAGTAGGTATCGTCGGCAGGGAATGTGCCGACTCCTTGTGAGTGCAATTGAAGAGATGTTAATATCTGTCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCAGATTTAGTGGAGACCTGGACCAAGGGCTTTGGATTCAAACCTGTAGGTGATGATGAAAAGCAGAAACTGAACAAAATAAACCTGATGGTTTTTCCTGGGACGGTATTACTTGAAAAACCCTTGTTCAAGGAAGATGAAACAGAAGATGACTCCACTATAGTAGGGGTCTATTGTAAAGGAGCCAAGTCAGACGCCGAACATGATTGCAGCAAGAATGACACAGATTACAGAATCGAATCATTGCAGCAAGATGTTGGAGACACCTCTGCTGATGAAATTGGTGCTAAGTCAGACGCGGAACATGGTTGCAGCGAGAATGACACGGATTACAGAGCTGAGCCATCATTAGGATTGAAAGAAACAGCCGATTGGAATACCTATTTAAGTGGGGAGAAGATCATGGGCTTTGTAAACAATGTGCAGGAATTGAGAATTAGTAGCCAAATGGAATCCACAAATGAGTCTGTGCAGAAGAACTCTAGTGGGAACTGTTGCACTAACAAAGACGGTACTGAATCAGAAGTAGTAAGAATTATTGAGAACAAGAATATCATCAAAGTGGGTGAAGGTCAGGAGAATGGCTTGCGGGGCCCTTTTTTGCAAATGTCCTGCAAAGCAGTATTAGGCAACAATTTTGATGTGGATGACATTATTGAATCCTCGGGGATGTATGATGAAACACAGCTTTCTTTGGAACAGAACTCGCAGGAGGCATTTGAAATGATGAATGAATGA 4383 0.4104 MLQNKEIQDLYDDNFEGSNDERRIFNEVFFSKDSVQPSRRCLVTGVINFECESSKNTNISLCSSNESSVITSPSSSKVTHSEDDCDVIQNLKETALDCMPERFNHEGSNHEDVNVKRMKFSLHELPCSRSNSKKALSSPSLSKEYVTDMPGAVIDFDSKPLSLLLFESSKYGVISSCYLLKHSIMQNKSRSKDDVDVLNCTKTTGDENLAKEVATSKVAASPVSQESFANKLVVTSPSSTAVEKSGSHFQFEETPKGFLSYDTDKSNLTLTPDLKKDPRDLLHYRSVQLLMMAGWSIEKRKRPCRRNFESVYRTPEGRPVREFIKAWRLCGQFLSADTYNSMQDNCKEWADIGQFWSDLANALINVEKEMNQSEPAAMLAYQWCLLDPFVVVIFIKRKIGALKKGELVKVTQSIVSRNYRMACTVKSSAWDWEGTPAAPFDLKHDSATATGSKLTTSLLNYHACNQKTGGGNDLGYEQTISGVIKLPIYECNSFDNQEEVYLEHNADSIGNQCREASVYERSSLGVGLLPDDGLGCTGTQSSACTSNVTTNSGNSSQVFRGLKVNTCQESNFRNFESSDEKYSENLLETSKRVDGDKPMDKAEEKDPSDGEVQDHYGIYLQESLNRYPHGARRGLVHCHASEAFHQSEYGEEGGGKSSRDCVLETDNTCSTPDVSLKKKIRRKCKRVSEIKLSMLYESDMMGSAVTDEVQLPNGEACGTHLEFEEGEHVVDNAEDRGVHRKLSSISSFQQQHIGRTNAKFRKSCHNYDPITEKPKSSGCQIADDDLLVSAILKKTGFISKTTQGESKSKCCKSRAQRKLKRQKGHCRLLPRNLGNEGKRIREGKRCYFGARTVLSWLIENGIISINDVIQYRNLKDNTAIKDGRITRDGIICKCCKKLLTLSEFKFHAGYRLNRPCLNLFMESGEPFTLCLLQAWSAEYKARKSGNQTVKADDDDKNDDSCGLCGDGGELICCDNCPSAFHLACLSAQDIPEGNWYCTNCTCQICENFVNDKEAPGARDSLQCLQCEHKYHENCLRGGSKPEGEISDGWFCSGRCQELYSGLQSRVGLVNHIDDGLSWMLLRCIQDDQKVHSAQWFALKALCNTKLTVALTIMGECFLSMVDPRTGIDMIPHVLYNRGSDFARLNFQGFYTVVLEKKDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRLLVSAIEEMLISVKVAKLVIAAIPDLVETWTKGFGFKPVGDDEKQKLNKINLMVFPGTVLLEKPLFKEDETEDDSTIVGVYCKGAKSDAEHDCSKNDTDYRIESLQQDVGDTSADEIGAKSDAEHGCSENDTDYRAEPSLGLKETADWNTYLSGEKIMGFVNNVQELRISSQMESTNESVQKNSSGNCCTNKDGTESEVVRIIENKNIIKVGEGQENGLRGPFLQMSCKAVLGNNFDVDDIIESSGMYDETQLSLEQNSQEAFEMMNE 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0618 1460 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1142 1234 IPR016181 -
Lele09g0618 1460 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1119 1258 IPR000182 GO:0016747
Lele09g0618 1460 CDD PHD1_AIRE 961 1000 - -
Lele09g0618 1460 Pfam Tify domain binding domain 883 933 IPR032308 -
Lele09g0618 1460 SUPERFAMILY FYVE/PHD zinc finger 953 1007 IPR011011 -
Lele09g0618 1460 ProSiteProfiles Zinc finger PHD-type profile. 958 1003 IPR019787 -
Lele09g0618 1460 Pfam PHD-finger 961 1002 IPR019787 -
Lele09g0618 1460 PANTHER PHD FINGER FAMILY PROTEIN 1 1381 - -
Lele09g0618 1460 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 945 1017 IPR013083 -
Lele09g0618 1460 SMART PHD_3 1002 1056 IPR001965 -
Lele09g0618 1460 SMART PHD_3 960 1001 IPR001965 -
Lele09g0618 1460 Gene3D - 1135 1245 - -
Lele09g0618 1460 MobiDBLite consensus disorder prediction 588 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0618 Lele-ChrLele09 4722019 4730010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0618 1 412 PHD Transcription Factor Family AT3G14980 35.266 1.44e-50 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele09g0618 TDBD 2.5e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0618 09 4722019 4730010 Lele11g0630 11 6122214 6129564 hybridization
Lele09g0618 09 4722019 4730010 Lele12g0704 12 15209786 15216447 hybridization