Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0589 ATGCGATTTCGGTTCTGCATCGACATGAACCTCATTCTGCTACCGTTTTTCTTCGCAAGTGTGGCTTTAGCCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGAGATAGGGAAGACGCTGGGAAAGAAGGACTGGAACTTCAGCGTGGATCCATGCAGTGGAGACAGTGGATGGAAGGTCCACTGTAACGGCAGCCATATTACTAGCATCAATATCCGAGAAGAGAGCCTTCAAGGTACTCTACCGCCTGAGCTTGTTAGGTTGCCGTACCTTCAAGACCTGATCCTTGTAAGAAACTACCTCAGCGGCACAATCCCTCCAGAATGGGGCTCCATGAAACTTGTTACAATCAACCTCTTTGCAAACCGTTTAACAGGTTCAATCCCAGCAGCTCTGGCAAACATTTCCACTCTCAAGTTTTTGAATCTTGCTTCAAACAATTTTACTGGGGAAATACCTGCAACATTCGCTTGCCTAACCAAGTTGAATCGCTTACGAATCAGTGACAACCAATTCTTTGGAAAGATACCCGATTTCATTGGGAACTGGAAGAATCTCCAAATACTAGCAATTGTAGGGAGTGGCTTGAGTGGGCCTATTCCGGTTGGACTTTCTCTTCTAGTAAACTTAACTTATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAATTTTCCGCAACTTGATGATATGACACAGTTGGGAAAACTGATGTTGAGGAGCTGCCACATTGTTGGATCTCTACGACTTGACTTCACTGAGAACATGCCTAAATTGGTTGAGTTAGACCTTTCTTACAACAACTTCAGCACCAGCAACTTGAAGCCTTCGCTTTGTAAACAACAGAATGTTGGACTCATCCCATGCTCCAGAAGTTGTCCTAAAACTTACTATTCGTTCCGCATAAATTGTGGTGGAGGGGAAGTATATGTTGGAGGGAAAAAATACGACGAAGACCGTACAGAGGGTCGAGCATCTCAACTATTCGTTAGTGAAAGATCAAACTGGGCATTCAGTAACACTGGTCACTTTGTTGGTGAAGAAGATCAAAGTGCCTCAAAATCTTACATTGCGGCTAATAATTCAGAACTCTTTATGGCGAATTCTGAACTGTACACAAGTGCACGCCTCTCTCCCATTTCTCTGACTTACTATGGTTTTTGTCTGCAAAATGGTAACTACACAGTAAACCTTCATTTTGCTGAGATAACGTTCACTGCTGATAAAAGCTTCAGGAGCTTGGGAAGACGAGTATTTGATGTCTACATTCAGACGATATACCTCTTCTTTGATGATTATGTGACCAGATTTTGCGATCCCATTGGAAAGTGGAAGTCGTCTACCTTTCGGCGTTGTTATTGCAATTGTGGTTGTGGGGGCAATTATGACTGTCTTGAACTAAGGGTTTTGGACACGCAAACTGGTTCCTTTACCTTGCAGCAAATTATGGAAGCCACAAACAACTTTGACGTTACCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTCTACAAGGGCTTCTTGTCTGATGGAACCATAATAGCCGTTAAGCAACTTTCTTCTAAATCACGTCAAGGGAATCGTGAGTTCTTAAACGAGATAGGGATGATTTCTGCTCTGCAGAATCCTTATCTTGTTAAGCTTTATGGATGCTGTGCACATGAGTTGAAAGACGGAGGTAATCTGATGGATCTCGTGGATCCAAGGTTGGGGATGGACGTAAAAACAGAGGAAATAATGGTTATGATTGATGTGGCTCTGCAAAGCACTCTGAACTCTCCAAGACTTAGGCCCACCATGTCCAAAGTGCTTAACATTCTTGAAGGCAGGCCCGATGTTCAGGAGGGAGTCTGA 1857 0.4335 MRFRFCIDMNLILLPFFFASVALASLVPEEVEALREIGKTLGKKDWNFSVDPCSGDSGWKVHCNGSHITSINIREESLQGTLPPELVRLPYLQDLILVRNYLSGTIPPEWGSMKLVTINLFANRLTGSIPAALANISTLKFLNLASNNFTGEIPATFACLTKLNRLRISDNQFFGKIPDFIGNWKNLQILAIVGSGLSGPIPVGLSLLVNLTYLRISNLNGPDSNFPQLDDMTQLGKLMLRSCHIVGSLRLDFTENMPKLVELDLSYNNFSTSNLKPSLCKQQNVGLIPCSRSCPKTYYSFRINCGGGEVYVGGKKYDEDRTEGRASQLFVSERSNWAFSNTGHFVGEEDQSASKSYIAANNSELFMANSELYTSARLSPISLTYYGFCLQNGNYTVNLHFAEITFTADKSFRSLGRRVFDVYIQTIYLFFDDYVTRFCDPIGKWKSSTFRRCYCNCGCGGNYDCLELRVLDTQTGSFTLQQIMEATNNFDVTNKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSRQGNREFLNEIGMISALQNPYLVKLYGCCAHELKDGGNLMDLVDPRLGMDVKTEEIMVMIDVALQSTLNSPRLRPTMSKVLNILEGRPDVQEGV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0589 618 Gene3D Ribonuclease Inhibitor 176 286 IPR032675 -
Lele09g0589 618 Pfam Malectin domain 300 426 IPR021720 -
Lele09g0589 618 FunFam Leucine-rich repeat receptor protein kinase EMS1 111 199 - -
Lele09g0589 618 ProSiteProfiles Protein kinase domain profile. 490 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0589 618 Gene3D Ribonuclease Inhibitor 29 175 IPR032675 -
Lele09g0589 618 Pfam Protein tyrosine and serine/threonine kinase 492 556 IPR001245 GO:0004672|GO:0006468
Lele09g0589 618 Gene3D - 297 434 - -
Lele09g0589 618 SUPERFAMILY L domain-like 60 273 - -
Lele09g0589 618 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 462 559 - -
Lele09g0589 618 SMART tyrkin_6 490 608 IPR020635 GO:0004713|GO:0006468
Lele09g0589 618 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Lele09g0589 618 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 557 614 - -
Lele09g0589 618 SUPERFAMILY Protein kinase-like (PK-like) 463 570 IPR011009 -
Lele09g0589 618 Gene3D Phosphorylase Kinase; domain 1 462 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0589 Lele-ChrLele09 4465905 4477994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0589 469 615 Receptor kinase-like Gene Family AT1G53420 28.846 1.00e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele09g0589 Malectin 4.3e-23 CL0202