Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0571 ATGAAACAGCAGATTCATTCATATATAACCATTCAAACGCATTGCTTCAATGTTATTATGTTCTTGAATCTTTTGTACTTCCAGCCCATTCATCGCCCACTGATACTTGTGTTTAAACAAAATTATCAGTACTTCTGCCATGTTGTGCTACAGAATTCTAGAAAAGAGAAGAAGGAAGGAGTTATTTTGAATACCAAGAGTCAAGGTGCATCAGCAGGGTATGCACTTTTGCTTTCTCTTATGCAACTAACAATTGAAGAAGGAAACGTTTTCAGTTGTGTTGGAGACTCAGATTTGGACTGGTCTTATTGCTTCTATTGTGTGTTTTGTGGGTTTGGAGTTGTGGGATTAATCTATGCTGTGTCTTCGCTTTTCTCTAACGTTGTTAGTATGATGAGTTTGCCTCTTATTCCTTTGTCTTCTGTTGTTTTGTACCATGAAACAATGGATGCTATGAAGGTTGTGGCCTTGTTGCTGGCAATTTTGAGTTTTGGTTCTTATATCTATCAGAAATATCTTGATCAGAATATGCTGCAACAGGAAGCAAATTTAGTTCATCTGACAACTAGCAGGTTCTTAAATTGTATCAGAATCGCTTTGTGGATCCAAATGAGCAAGTCTCTGGTTTTAGCCTTTTATATCACCTTATGCTGTATCTCTTTTGTCATTTCCAAGATCATCATCTCAATTCTCCTCTACAAAAGATGGAAAAGAAAGCACATGATTTTTGAAGAAGCTTATCCAGGTGGGAAGATGGTGATATTTAGATGTTCAGTGCTTCAATCAATAGCATCTGATGTGGTTTTAAAGAAGACATTGAAACTGAGCAACAAGGACATTATAGGATGTGGTGGTTATGGAACAGTTTATAAACTGCAAATAGATGACAGCACAGCTTTAGCAGTGAAAAGACTCAACAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGAAGCAATGGCAGATATAAAACATCGCAATATTGTGACTCTTCATGGTTACTATACTGCCCCTCATTACAACCTTCTCATATATGAACTCATGTCTAATGGAAGCTTAGATTCCTTTCTTCATGGAAGATCAAAGAACAAGTTGTTTTTGGATTGGCCAACAAGGTACAGAATAGCCCTAGGTGCTGCTAGGGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGATATCAAATCAAGTAATATATTGCTCGATCACAACATGGAGGCTCGAGTTTCTGATTTCGGATTGGCCACCTTAATGGAACCCAACAAAACTCATGTTACAACCATTGTTGCTGGAACTTTCGGATACTTAGCCCCTGAATACTTTGATACGGGAAGAGCAACTGTAAAAGGGGATGTTTACAGCTTTGGAGTTGTATTATTGGAGCTTTTAACTGGGAAAAAACCCTGTGATGAAGCATTTATAGAGGAAGGAAGCAAGCTCGTCACATGGGTGAAGGCTGTAGTTGAAGAGAGGAAGGAGGAGTTAGTTATTGACAACACCATGGGGTCTTGTCCCATGAAAGAGGTTGACAATGTGTTCAACGTTGCAATGATGTGTCTTGAACCGGATCCTCTCAAGAGGCCAACCATGGCTGAGGTTGTCACCTTGCTGGAGCAAACAAACCCACACAAACTTGTTAAAGCTTCCTCCCGATAG 1680 0.394 MKQQIHSYITIQTHCFNVIMFLNLLYFQPIHRPLILVFKQNYQYFCHVVLQNSRKEKKEGVILNTKSQGASAGYALLLSLMQLTIEEGNVFSCVGDSDLDWSYCFYCVFCGFGVVGLIYAVSSLFSNVVSMMSLPLIPLSSVVLYHETMDAMKVVALLLAILSFGSYIYQKYLDQNMLQQEANLVHLTTSRFLNCIRIALWIQMSKSLVLAFYITLCCISFVISKIIISILLYKRWKRKHMIFEEAYPGGKMVIFRCSVLQSIASDVVLKKTLKLSNKDIIGCGGYGTVYKLQIDDSTALAVKRLNKGTADRERGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMSNGSLDSFLHGRSKNKLFLDWPTRYRIALGAARGISYLHHDCIPHIIHRDIKSSNILLDHNMEARVSDFGLATLMEPNKTHVTTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPCDEAFIEEGSKLVTWVKAVVEERKEELVIDNTMGSCPMKEVDNVFNVAMMCLEPDPLKRPTMAEVVTLLEQTNPHKLVKASSR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0571 559 ProSiteProfiles Protein kinase domain profile. 275 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0571 559 SUPERFAMILY Protein kinase-like (PK-like) 267 548 IPR011009 -
Lele09g0571 559 Gene3D Transferase(Phosphotransferase) domain 1 351 557 - -
Lele09g0571 559 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 178 547 - -
Lele09g0571 559 FunFam Receptor-like serine/threonine-protein kinase 246 350 - -
Lele09g0571 559 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524
Lele09g0571 559 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 351 557 - -
Lele09g0571 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Lele09g0571 559 Gene3D Phosphorylase Kinase; domain 1 251 350 - -
Lele09g0571 559 SMART serkin_6 275 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0571 559 Pfam Protein tyrosine and serine/threonine kinase 277 544 IPR001245 GO:0004672|GO:0006468
Lele09g0571 559 Pfam Purine nucleobase transmembrane transport 111 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0571 Lele-ChrLele09 4326368 4334001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0571 206 547 Receptor kinase-like Gene Family AT2G35620 46.377 3.22e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele09g0571 Pkinase 3.6e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0571 09 4326368 4334001 Lele11g0582 11 5728751 5735183 hybridization
Lele09g0571 09 4326368 4334001 Lele12g0755 12 15640694 15644044 hybridization