Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0556 ATGGGCGAAGACGAAAAACCAAAAGCCGGACATTTCTCCGGCCAACAGTATCCCAGTGCGCCGCCTCAATACGGCCCATACTATCCTCCTCCTCCTACTCCTCCACCTCCTCCTCCGCCTCCACCAGAACCACAGCCTCCGACTGGCTTCCCCCAACCTGTTCCTCCGCCGGGTTCTGCCCAGCCCCCTCCCGTTCCACCTGAGTATTACGCTCAGGGCTACCAAGCTGTTCCTGGGTATCCTGTAGCTGAAGGAAGACCTGTAAGACCTCGCCGTCTTCGTTGTTGTGGTCTTGGTTGTGGCTGGTGCCTGTTTATATTAGGGTTCTTCCTTGCAACGATACCATGGTATGCTGGGGCAGTGATTCTGATGTGTTCCAGAAGATATGAAATAGACTCCAGAGAGAAACCTGGATTGCTTGCTTGTTCTGTTGCTGCTGTTATCGTTACTATTGCTATTATTATTGGTGCGACGAAGGGAGCAAATCTCTGAGTGGTGAATTGGGTGTGGGTGAGGCCTAAACGACTTGAAAGATGCCTCAAACGACAAAGCCTCATGGTAAACTCATACAAACTTCTGTTCGGAGACTTGAAGGAAATGACTCACATGATTCAAGAAGCAAAGTCAAAGCCAATCACCTTGACCAATGACATTATTGCCCGTGTCCTTCCTTTTCATCCCCAAATGATTCAACACTATGGGCTCAGGGATATAAGTTTACCATTTGGAACTCAAGTTGGGATTTCAGTAATTATGGTACAACATGATCCTCAGTTGTGGGGAGAAGACACAAAGGAGTTCAATCTACAAAGATTCTCTGAAGGAATCTCTAAAGAAACTAAGAGTCGCATGCAACTGAGAATGAACTAA 870 0.477 MGEDEKPKAGHFSGQQYPSAPPQYGPYYPPPPTPPPPPPPPPEPQPPTGFPQPVPPPGSAQPPPVPPEYYAQGYQAVPGYPVAEGRPVRPRRLRCCGLGCGWCLFILGFFLATIPWYAGAVILMCSRRYEIDSREKPGLLACSVAAVIVTIAIIIGATKGANLXVVNWVWVRPKRLERCLKRQSLMVNSYKLLFGDLKEMTHMIQEAKSKPITLTNDIIARVLPFHPQMIQHYGLRDISLPFGTQVGISVIMVQHDPQLWGEDTKEFNLQRFSEGISKETKSRMQLRMN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0556 289 MobiDBLite consensus disorder prediction 22 69 - -
Lele09g0556 289 SUPERFAMILY Formin homology 2 domain (FH2 domain) 32 171 - -
Lele09g0556 289 SUPERFAMILY Cytochrome P450 225 275 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele09g0556 289 PRINTS Proline rich extensin signature 60 76 - -
Lele09g0556 289 PRINTS Proline rich extensin signature 19 31 - -
Lele09g0556 289 PRINTS Proline rich extensin signature 35 56 - -
Lele09g0556 289 Gene3D Cytochrome P450 199 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele09g0556 289 MobiDBLite consensus disorder prediction 1 70 - -
Lele09g0556 289 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 162 IPR044804 -
Lele09g0556 289 Pfam Cytochrome P450 230 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0556 Lele-ChrLele09 4206477 4211633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0556 70 163 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.577 2.01e-17 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0556 09 4206477 4211633 Lele09g0556 09 4206477 4211633 ECH
Lele09g0556 09 4206477 4211633 Lele11g0564 11 5596785 5598150 hybridization
Lele09g0556 09 4206477 4211633 Lele12g0768 12 15723668 15729123 hybridization