Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele09g0556 | ATGGGCGAAGACGAAAAACCAAAAGCCGGACATTTCTCCGGCCAACAGTATCCCAGTGCGCCGCCTCAATACGGCCCATACTATCCTCCTCCTCCTACTCCTCCACCTCCTCCTCCGCCTCCACCAGAACCACAGCCTCCGACTGGCTTCCCCCAACCTGTTCCTCCGCCGGGTTCTGCCCAGCCCCCTCCCGTTCCACCTGAGTATTACGCTCAGGGCTACCAAGCTGTTCCTGGGTATCCTGTAGCTGAAGGAAGACCTGTAAGACCTCGCCGTCTTCGTTGTTGTGGTCTTGGTTGTGGCTGGTGCCTGTTTATATTAGGGTTCTTCCTTGCAACGATACCATGGTATGCTGGGGCAGTGATTCTGATGTGTTCCAGAAGATATGAAATAGACTCCAGAGAGAAACCTGGATTGCTTGCTTGTTCTGTTGCTGCTGTTATCGTTACTATTGCTATTATTATTGGTGCGACGAAGGGAGCAAATCTCTGAGTGGTGAATTGGGTGTGGGTGAGGCCTAAACGACTTGAAAGATGCCTCAAACGACAAAGCCTCATGGTAAACTCATACAAACTTCTGTTCGGAGACTTGAAGGAAATGACTCACATGATTCAAGAAGCAAAGTCAAAGCCAATCACCTTGACCAATGACATTATTGCCCGTGTCCTTCCTTTTCATCCCCAAATGATTCAACACTATGGGCTCAGGGATATAAGTTTACCATTTGGAACTCAAGTTGGGATTTCAGTAATTATGGTACAACATGATCCTCAGTTGTGGGGAGAAGACACAAAGGAGTTCAATCTACAAAGATTCTCTGAAGGAATCTCTAAAGAAACTAAGAGTCGCATGCAACTGAGAATGAACTAA | 870 | 0.477 | MGEDEKPKAGHFSGQQYPSAPPQYGPYYPPPPTPPPPPPPPPEPQPPTGFPQPVPPPGSAQPPPVPPEYYAQGYQAVPGYPVAEGRPVRPRRLRCCGLGCGWCLFILGFFLATIPWYAGAVILMCSRRYEIDSREKPGLLACSVAAVIVTIAIIIGATKGANLXVVNWVWVRPKRLERCLKRQSLMVNSYKLLFGDLKEMTHMIQEAKSKPITLTNDIIARVLPFHPQMIQHYGLRDISLPFGTQVGISVIMVQHDPQLWGEDTKEFNLQRFSEGISKETKSRMQLRMN | 289 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele09g0556 | 289 | MobiDBLite | consensus disorder prediction | 22 | 69 | - | - | |
Lele09g0556 | 289 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 32 | 171 | - | - | |
Lele09g0556 | 289 | SUPERFAMILY | Cytochrome P450 | 225 | 275 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lele09g0556 | 289 | PRINTS | Proline rich extensin signature | 60 | 76 | - | - | |
Lele09g0556 | 289 | PRINTS | Proline rich extensin signature | 19 | 31 | - | - | |
Lele09g0556 | 289 | PRINTS | Proline rich extensin signature | 35 | 56 | - | - | |
Lele09g0556 | 289 | Gene3D | Cytochrome P450 | 199 | 286 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Lele09g0556 | 289 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
Lele09g0556 | 289 | PANTHER | 60S RIBOSOMAL PROTEIN L18A-LIKE | 1 | 162 | IPR044804 | - | |
Lele09g0556 | 289 | Pfam | Cytochrome P450 | 230 | 275 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele09g0556 | Lele-ChrLele09 | 4206477 | 4211633 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele09g0556 | 70 | 163 | Cytoplasmic Ribosomal Protein Gene Family | AT1G29970 | 33.577 | 2.01e-17 | 77.0 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele09g0556 | 09 | 4206477 | 4211633 | Lele09g0556 | 09 | 4206477 | 4211633 | ECH | |
Lele09g0556 | 09 | 4206477 | 4211633 | Lele11g0564 | 11 | 5596785 | 5598150 | hybridization | |
Lele09g0556 | 09 | 4206477 | 4211633 | Lele12g0768 | 12 | 15723668 | 15729123 | hybridization |