Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0541 ATGCACGTAGGTTGGATAACGATTAACGAATACTACTATTCTACTGTGCTTATGATTGATTGTCTTGAGGTTGCCAAGAAATATTACCAGGTAGCTGGTGTTTCTCATAAGGTGGAGGTAAAATTTGGACTCGCAGCAGATACCCTACAATCTTTAATTTTGGATGGTGAAGCTGGCAGCTATGATTTTGCATTTATTGATGCTGATAAAATGATGACCCAGGAATATTTTGAACTGCTGCTGCCGCTGGTTAGAGTTGGAGGTCTCATTGTAATGGACAATGTTCTGTGGCACGGAAAAGTTGCCGACCCACTGGTGAATGACCCTAAAACTATCAGCATTAGAAACTTTAATCAACAGTTGGTCCAGGACAAGCGGGTAAGCACCAGTATGCTTTGTTCTGGAAGACTTGATTTGGATCATGAATCTGAATCGTAG 438 0.4132 MHVGWITINEYYYSTVLMIDCLEVAKKYYQVAGVSHKVEVKFGLAADTLQSLILDGEAGSYDFAFIDADKMMTQEYFELLLPLVRVGGLIVMDNVLWHGKVADPLVNDPKTISIRNFNQQLVQDKRVSTSMLCSGRLDLDHESES 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0541 145 PANTHER O-METHYLTRANSFERASE-RELATED 20 134 - -
Lele09g0541 145 Gene3D Vaccinia Virus protein VP39 5 136 IPR029063 -
Lele09g0541 145 Pfam O-methyltransferase 22 133 IPR002935 GO:0008171
Lele09g0541 145 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 133 IPR029063 -
Lele09g0541 145 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 145 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0541 Lele-ChrLele09 4045252 4047293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0541 20 136 Monolignol Biosynthesis Gene Families AT3G62000 70.940 4.85e-57 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0541 09 4045252 4047293 Lele11g0548 11 5393214 5396459 hybridization
Lele09g0541 09 4045252 4047293 Lele12g0780 12 15897913 15900131 hybridization