Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0534 ATGGCGGCCGAGGTTGTCTTGCTGGATGCGAAGATAAGCATGTTCGGGATGAGGGCTAGGGTTGCATTGGCGGAGAAAGGCGTTAAGTATGAGGACAGGGAAGAGAATCTGGGCAACAAGAGCCCTCTGCTTCTGCAAATGAACCCGGTTCACAAGACAATCCCGGTTCTGATCCATAACGGCAAACCCATCAACGAATCCCTCATAATCGTTGAGTACATTGATGAAGTTTGGAAGGGCCAAGCTCCATTCCTCCCCTCCGATCCTTATCAGAGAGCTCAAGCAAGATTCTGGTCTGATTTCGTTGGCTCCAAGATTCACGCGCCTGGGAAGAAGATTTGGGCGGCAAAAGTTGAAGAGCATGAAGCGGGGAAGAAAGAACTGATTGAGAACTTGAAGAAATTGGAGGAGGTTCTTGGAAACAAGCCATATTTTGGAGGTGACACATTTGGGTTTGTGGATGTTGCTCTGATTCCATTCTATAAATGGTTCTATGTTTATGAGAAATTAGCAAACTTCAAAGTGGAAGCAGAGTGTCCAAAGATCATTGAATGGGGAAAGAGATGCATGAAGAGAGAAAGTGTTGCAAAATCACTTGCTGATGAACAGGAGATCTACGACTTCGTCATGGGCTACAGGAAGATGCTTCAGTTGGATTAA 660 0.4591 MAAEVVLLDAKISMFGMRARVALAEKGVKYEDREENLGNKSPLLLQMNPVHKTIPVLIHNGKPINESLIIVEYIDEVWKGQAPFLPSDPYQRAQARFWSDFVGSKIHAPGKKIWAAKVEEHEAGKKELIENLKKLEEVLGNKPYFGGDTFGFVDVALIPFYKWFYVYEKLANFKVEAECPKIIEWGKRCMKRESVAKSLADEQEIYDFVMGYRKMLQLD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0534 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Lele09g0534 219 Gene3D - 88 219 - -
Lele09g0534 219 Pfam Glutathione S-transferase, N-terminal domain 10 76 IPR004045 -
Lele09g0534 219 Gene3D Glutaredoxin 1 87 - -
Lele09g0534 219 FunFam Glutathione S-transferase U20 88 219 - -
Lele09g0534 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 206 IPR045073 -
Lele09g0534 219 Coils Coil 118 138 - -
Lele09g0534 219 CDD GST_N_Tau 5 78 - -
Lele09g0534 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Lele09g0534 219 Pfam Glutathione S-transferase, C-terminal domain 122 185 - -
Lele09g0534 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lele09g0534 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Lele09g0534 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lele09g0534 219 FunFam Tau class glutathione S-transferase 1 87 - -
Lele09g0534 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lele09g0534 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0534 Lele-ChrLele09 3992400 3993139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0534 1 219 Glutathione S-transferase Gene Family AT1G17180 64.840 5.75e-104 297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0534 09 3992400 3993139 Lele11g0532 11 5270995 5272400 hybridization