Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0527 ATGGCGGGTGAGGTAGTTCTGTTGGATACATGGGTGAGCATGTTTGGAATGAGGGTTAGGATCGCACTGGCAGAGAAGGGTGTGAAGTATGAGTATAAGGAAGAGAATCTGAGTAACAAGAGCCCTCTGCTTCTGCAAATGAATCCGATTCACAAGAAAATCCCAGTTCTAATCCACAACGGCAAACCCATCTGCGAATCCGCCATTATTGTGGAGTACATCGACGAGGTGTGGAAGGACAAATCTCCGCTTTTGCCTTCAGATCCATACGAGCGGGCTCAAGCCAGGTTCTGGGTTGATTTCATTGACAAAAAGGTGTATGAGACATGGAGGAGAATGTGGCTATCAAAAGGAGAGGAGCACGAGACAGCGAAGAAGGAGCTGCTAGACATTTTTAAGCTTCTGGAAGGGACACTTGGGGACAAGCCCTTTTATGGGGGTGACTCATTTGGGTTTCTTGATGTTGGCTTGATCCCATTTTCTTGCTGGTTTTACACATTTGAGACTTATGGACACTTCAAGATGGAGGCAGAGTGCCCTAAACTCATGGCTTGGGTCAAGAGGTGCGTTCAGAGCAAAGAGTGTGTGTCCAAGACTCTTCCTGATGAGAAGAAGGTCTATGAATATATTGTGGCCTTAGAGAAGGTCATAACTGGAGCTTGA 663 0.4661 MAGEVVLLDTWVSMFGMRVRIALAEKGVKYEYKEENLSNKSPLLLQMNPIHKKIPVLIHNGKPICESAIIVEYIDEVWKDKSPLLPSDPYERAQARFWVDFIDKKVYETWRRMWLSKGEEHETAKKELLDIFKLLEGTLGDKPFYGGDSFGFLDVGLIPFSCWFYTFETYGHFKMEAECPKLMAWVKRCVQSKECVSKTLPDEKKVYEYIVALEKVITGA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0527 220 Gene3D - 88 218 - -
Lele09g0527 220 Pfam Glutathione S-transferase, C-terminal domain 123 188 - -
Lele09g0527 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 209 IPR010987 -
Lele09g0527 220 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lele09g0527 220 FunFam Tau class glutathione S-transferase 1 87 - -
Lele09g0527 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Lele09g0527 220 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Lele09g0527 220 FunFam Glutathione S-transferase U20 88 219 - -
Lele09g0527 220 CDD GST_N_Tau 5 78 - -
Lele09g0527 220 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Lele09g0527 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lele09g0527 220 Gene3D Glutaredoxin 1 87 - -
Lele09g0527 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Lele09g0527 220 CDD GST_C_Tau 89 213 IPR045074 GO:0004364|GO:0006749
Lele09g0527 220 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0527 Lele-ChrLele09 3913419 3914194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0527 1 215 Glutathione S-transferase Gene Family AT1G78380 63.256 1.58e-103 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0527 09 3913419 3914194 Lele11g0530 11 5258835 5259612 hybridization
Lele09g0527 09 3913419 3914194 Lele12g0788 12 15924775 15925516 hybridization