Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0526 ATGGCGATAGGTTGTTTGATGCTAATATTTTGTTTTGGCGTCGTTCTTGTGAGTTCGATTAATGAAGATGGCTCAAATCTTTTGGAGTTCAAAGCTTCTCTTGTTGACCCACAAAATTCTCTTCGCAACTGGAATTCTTCTGATTTTTCTCCTTGCAATTGGAAAGGTGTGCATTGTGATGATTCAATGGTAACTTCTGTAAATCTTCATCAGCTCAATCTGTCTGGTGCTATGTCTCCTAGCATCTGTAATCTTCCACGGCTAGTTGAGTTGAATGTGTCGAAAAATTTCATTTCTGGTCCCATTCCTGTGGATTTTGTTAACTGTCGTAGTTTAGAGATATTAGACGTTTGCACAAATAGGTTCCATGGAGAACTTCTGATTCCTTTCAGCAAAATCACCAGACTAAGAAAGCTTTACGTCTGTGAAAATTATATGCATGGTGAAGTGCCTGAAGAGTTTGGGAATTTAACTTCACTTGAAGAGCTAGTCATTTATACCAACAACTTAACTGGAAGAATTCCCGCATCAATCAGCAAGTTGAAGCAGCTTAAAATCATCAGGGCAGGTGTCAATAGCATCTCAGGGCCAATACCCGCGGAAATAAGCCAGTGTGTGAGCTTGCAGATATTAGGATTCTCACAGAATCAGCTAGAAGGGTCCATTCCAAGGGAGCTTGAAAAGCTACAGAACCTTACTGAGTTAAATCTATGGCAGAACTATTTATCTGGTGAGATTCCTCCTGAGATTGGAAACCTCAGTAGCCTGCAATCGCTTGCTTTGCATCATAATTCATTTGGTGGAGCTCTCCCCAAGGAGCTTGGAAAGTTATCAAATTTACAAAGGTTGTACATATACACTAACCGCTTGAATGGCTCAATTCCGGTGGAGCTAGGGAACTGCACAAATGCTATTGAGATAGATCTGTCTGAGAACCGTTTAAGTAAAAATATTCCCAAAGAGTTGGGTCAGATCTCTGGTCTTAGATTGCTTCATCTATTTGAAAACTTTCTGCAGGGAGAGATACCTCAGGAGCTTGGGAAGTTAAAGCTGTTAAAGAATTTAGACCTGTCTATAAATAACTTAGCAGGTACAATTCCGGAAGCGTTCCAAAATCTTACATACATGGAGGATTTGCAGCTATTTGATAATCAACTTGAGGGTAAAATTCCTCCTTATCTTGGCTCTAATAGCAACCTTACAGTTCTTGATATATCTACAAATAATCTTGTTGGTATGATACCTCCCCATCTTTGCCGCAATCAGAAATTGCAGTTCCTGAGCCTTGGGTCAAATAAGTTGCTTGGCAATATTCCACATGACCTGAAAATGTGCATGCCTCTTGTGCAGCTAATGCTGGGAGACAACCAACTGACAGGAAGCTTCCCTGTTGAATTGTATGAACTTCATAATCTTTCTGCTCTTGAACTGAATCAGAACCGATTCTCAGGACTAATTGACCATGGGATAGGTCGACTCAAGAATTTAAAGAGGCTCCTCTTATCAGATAATTATTTTTTAGGTTATCTTCCTCCTGAGATTGGGAATTTAACCCAGCTTGTCTCATTCAACATTTCCTCTAATTTTCTCAGTGGAAGTATATCTCATGAGTTGGGAAACTGCATAAAACTCCAGAGGCTTGATCTGAGTAGAAATGAGTTCACTGGTGATCTTCCAGATGATATTGGCAAGTTGGTGAATCTGGAGCTGTTGAAACTTTCAGATAATAGACTAACTGGAAGAATACCAAGTGCTTTAGGGGACCTTAAACGTCTCACAGATTTGGAACTGGGGGGTAACTTATTTGTTGGGAGCATTCCTTTTCATTTAGGACAATTAGCTGCTCTTCAGATTGCTCTTAACTTGAGTTACAACAAACTTTCTGGTACAATTCCTGACAGACTTGGGAGCTTGCAAATGTTGGAAAGTCTTTATTTAAATGACAATCAGCTTGTTGGTGAAATTCCTTCTTCAATTGGTGATCTTCCCAGCCTCATAGTGTGCAATGTTTCCAACAATAAACTGTTAGGGGTCATTCCAGACACACTGGCATTTCGGAAGATGAATTTTACAAATTTTGTTGGAAACAATGGCTTGTGTCGAGTAGGTTCATATTATTGTCATCCATCTCATATTCCTAGCTGGACCGGAGATGGTTCATCAAAACAGAAGATAGTGAGCATTGTTTCTGCGGTGGTGGGATTTGTTTCTCTTATTTTCATCATCTGTATATGTTGGGCCATGAAACGCCGTAACTCTTCTTTCGTCTCAATTGAAGGGCAATCAAAGCCTCATGTCCTTGATAACTATTACTTCCCTAAAGAAGGTTCATATGGCTACATTGCGCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATATATAGCTTTGGGGTAGTTTTACTGGAACTAGTTACTGGGAGGTCGCCGGTTCAACCTTTGGAGCAGGGCGGTGATCTAGTTACTTGGGTGAGAAGATCGATTCAAGCGTCGGTACCGACATCTGAATTATTGGACAAAAGATTAAATCTGAGTGCACAAAAAACAATCAACGAGATGTCTCTTGTTCTCAAAATTGCTCTGTTTTGCACCAGTACATCCCCACTTAATCGGCCAACTATGAAAGAAGTCATTGCGATGTTGATTGATGCTAGGGAGTATGTCAACAATTCTTCATTGACTCCTACATCTGAATCCCCACTAAATGAAGATGCTTCTTACCAAGGTGATCTAGAGTTGTAA 2751 0.402 MAIGCLMLIFCFGVVLVSSINEDGSNLLEFKASLVDPQNSLRNWNSSDFSPCNWKGVHCDDSMVTSVNLHQLNLSGAMSPSICNLPRLVELNVSKNFISGPIPVDFVNCRSLEILDVCTNRFHGELLIPFSKITRLRKLYVCENYMHGEVPEEFGNLTSLEELVIYTNNLTGRIPASISKLKQLKIIRAGVNSISGPIPAEISQCVSLQILGFSQNQLEGSIPRELEKLQNLTELNLWQNYLSGEIPPEIGNLSSLQSLALHHNSFGGALPKELGKLSNLQRLYIYTNRLNGSIPVELGNCTNAIEIDLSENRLSKNIPKELGQISGLRLLHLFENFLQGEIPQELGKLKLLKNLDLSINNLAGTIPEAFQNLTYMEDLQLFDNQLEGKIPPYLGSNSNLTVLDISTNNLVGMIPPHLCRNQKLQFLSLGSNKLLGNIPHDLKMCMPLVQLMLGDNQLTGSFPVELYELHNLSALELNQNRFSGLIDHGIGRLKNLKRLLLSDNYFLGYLPPEIGNLTQLVSFNISSNFLSGSISHELGNCIKLQRLDLSRNEFTGDLPDDIGKLVNLELLKLSDNRLTGRIPSALGDLKRLTDLELGGNLFVGSIPFHLGQLAALQIALNLSYNKLSGTIPDRLGSLQMLESLYLNDNQLVGEIPSSIGDLPSLIVCNVSNNKLLGVIPDTLAFRKMNFTNFVGNNGLCRVGSYYCHPSHIPSWTGDGSSKQKIVSIVSAVVGFVSLIFIICICWAMKRRNSSFVSIEGQSKPHVLDNYYFPKEGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPTSELLDKRLNLSAQKTINEMSLVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVNNSSLTPTSESPLNEDASYQGDLEL 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0526 916 FunFam Leucine-rich repeat receptor-like protein kinase TDR 192 392 - -
Lele09g0526 916 Gene3D Ribonuclease Inhibitor 19 168 IPR032675 -
Lele09g0526 916 SUPERFAMILY Protein kinase-like (PK-like) 760 892 IPR011009 -
Lele09g0526 916 Gene3D Transferase(Phosphotransferase) domain 1 753 904 - -
Lele09g0526 916 SMART LRR_typ_2 638 662 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 277 301 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 565 589 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 157 181 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 398 421 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 493 517 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 349 372 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 469 492 IPR003591 -
Lele09g0526 916 SMART LRR_typ_2 229 253 IPR003591 -
Lele09g0526 916 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Lele09g0526 916 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 765 884 - -
Lele09g0526 916 Pfam Leucine rich repeat 543 601 IPR001611 GO:0005515
Lele09g0526 916 SUPERFAMILY RNI-like 66 387 - -
Lele09g0526 916 Gene3D Ribonuclease Inhibitor 229 303 IPR032675 -
Lele09g0526 916 SUPERFAMILY RNI-like 355 685 - -
Lele09g0526 916 MobiDBLite consensus disorder prediction 895 916 - -
Lele09g0526 916 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 177 - -
Lele09g0526 916 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 397 711 - -
Lele09g0526 916 Pfam Protein tyrosine and serine/threonine kinase 778 883 IPR001245 GO:0004672|GO:0006468
Lele09g0526 916 Gene3D Ribonuclease Inhibitor 169 228 IPR032675 -
Lele09g0526 916 ProSiteProfiles Protein kinase domain profile. 523 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0526 916 Gene3D Ribonuclease Inhibitor 305 391 IPR032675 -
Lele09g0526 916 Gene3D Ribonuclease Inhibitor 393 711 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0526 Lele-ChrLele09 3906841 3910882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0526 776 895 Receptor kinase-like Gene Family AT1G73080 34.351 5.54e-15 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele09g0526 PK_Tyr_Ser-Thr 1.6e-07 CL0016