Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0522 ATGTATATAATGGTGGGCAACGCTCAAGGAGCAATGGCTTATCTTGCTTCCCCTGTCAGTTTGGGAGGTCTAGTTGGAGTGAGTTCTTCTGGGAGGACCCACTCTATTGGAAGAAGAGTTTCTCTTTCTGGAGGAAACTTTGAAGGTAGAAGGACATGGCATTGTGTCTCCTTGTCACTTTGTAGATATTCGGTGACTACAACGGATTTCATACCGGACCAAGGCAATTCAGTGTCTCTTGACTCTAACAGTGATAGAGGAAGTACGGGTACTGGAGACAATAATGCTGGTTTTGTCCTTAAGCCACCTCCAAAGCCGGTATTGAAGTCTTCAGAGACCATGGGTAACTCCGTTTTAGGTGCAAGTTCAGAAGGATGGGATCCCTCCAAAGCTAAGCAATTTGGTAATGAAAAGTTAGATGATGTTGAAGAGAGGAATAAGGTGATTGAGTCAATTGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGAAAATTCAAAGTTTGATGGCAAAAGAAATAATGGACCAGTTAGCAAACCTGCAATGTCTAATACAACCACTAATCCTAAGACTGATAAATTGGCAAACTCAACGACAAACCAGCAGTCTAGAACTGTGAAGAGCGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCAGAAGGTTGCTAAGGAAACACCCAAGCCTAAAACTAAGAATGGAGGAGGGAAATCTCAAACAGGAGATGGAGGAAAGGTGGCATTTCAGTCGCCTACTCCTCCACGAGCTCCTCAGCCTTTGTTACAAGCTAAACCAGCTGTAGCTCCCCCACCAGTCAAAAAACCTGTTCTGAAGGACAATGGAGCTGCTGGAACATCTGTTAAAGATAAAGAAAGGAAAGGGCCAATTTTGATTGACAAGTTTGCTAGCAAGAAACCAGTAGTTGATCCTCTAATTGCTCAAGCTGTTCTAGCTCCTACAAAACCAGGAAAGGGCCCTCCTCCTGTAAAGTTTAAAGATGATTACCGGAAGAAAGGTTCTCCAACTGGAGGTCCAAGGAGAAGAGTATTAGATGATGATGTCGAGGATACATCAGAACTTGATGTCTCTATTCCTGGTGCTGCAACAGCAAGAAAAGGGAGGAAGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGAGGCTGCTCCTGTCAAAGTAGAAATTCTAGAGGTTAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCAATCAGTGATGGTGAAATCCTGGGTTATCTATACGCCAAGGGGATTAAACCAGACGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTCATAGATGCCGATCCTATCAGAGTTGAGGGATTGGTGAAGAAAAGGGAAATTCTAGATGAAGATGATCTTGACAAACTCAAAGATAGGCCTCCTGTTATTACTATCATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGGTAGCAGCTTCAGAAGCTGGTGGGATTACACAAGGAATTGGGGCATATAGAGTTCAAGTTCCTGTTGATGGCAAGTTGCTGCCTTGTGTTTTTCTTGACACCCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACAGATATTGCAATCGTTGTCGTAGCTGCTGATGATGGAATTCGTCCTCAAACAAACGAAGCCATTGCTCATGCCAAAGCAGCAGGAGTACCCATAATTATCGCTATAAACAAGATAGATAAAGATGGAGCAAATCCTGACCGAGTCATGCAAGAGCTATCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGGGACATCCCAATGGTTCAGATAAGCGCTCTTAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCGAAGGGCACAGTCGTTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCTACTTTTATAGTGCAGAATGGCACCCTTAAAAGGGGAGACGTAGTAGTTTGCGGAGAAGCTTTTGGGAAGGTGCGGGCTTTATTTGATGATGTTGGAAAACGTGTTGATTCATCTGCACCCTCTATACCTGTTCAGGTTATTGGATTGAATAATGTTCCAATGGCTGGTGATGAATTTGAGGTTATTAACTCCCTTGATGCTGCCCGTGAAAAGGCAGAGTCTCGTGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAGGCTGGGGATGGGAAGGTCACACTTTCTTCTTTAGCTTCTGCAGTTTCGTCAGGAAGGCTTTCTGGATTAGACTTGCACCAACTAAACATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCCTACAGGTGCTACCGCAAGATAATGTCACCTTGAAGTTTTTGTTGGAAGCAACTGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGTACCGGGTTCTGTAAAAAGCCACGCAGAAAATAAGTTGGTGGAGATTAGATCATATAAAGTTATTTATGACCTAATTGATGATGTGCGGAATGCAATGGAAGGACTTCTGGAGCCCGTGGAGGATCAAGTAACGATTGGCTCAGCTGAAGTAAGGGCCACGTTCAGCAGTGGTAGTGGTCGTGTTGCCGGATGCATGGTTAATGAGGGAAAAGTAACGAAAGACTGTGGCATTCGAGTCATTCGTAAGGGAAAGGTTGTTCATGTTGGAGTGCTTGATTCTTTGAGACGAGTAAAGGAGAGTGTAAAGGAGGTAAGTGCTGGTCTAGAGTGTGGAATTGGTTTAGAAGAATACGATGACTGGGAAGAAGGAGATATTATCGAGGCTTTCAACACGGTTCAGAAGAAGCGGACCCTTGAAGAGGCATCAGCTTCAATGGCTGCAGCAGTGGAAGGAGTAGGAGTAGAGTAG 3036 0.4433 MYIMVGNAQGAMAYLASPVSLGGLVGVSSSGRTHSIGRRVSLSGGNFEGRRTWHCVSLSLCRYSVTTTDFIPDQGNSVSLDSNSDRGSTGTGDNNAGFVLKPPPKPVLKSSETMGNSVLGASSEGWDPSKAKQFGNEKLDDVEERNKVIESIGEVLEKAEKLENSKFDGKRNNGPVSKPAMSNTTTNPKTDKLANSTTNQQSRTVKSVWRKGDTVANVQKVAKETPKPKTKNGGGKSQTGDGGKVAFQSPTPPRAPQPLLQAKPAVAPPPVKKPVLKDNGAAGTSVKDKERKGPILIDKFASKKPVVDPLIAQAVLAPTKPGKGPPPVKFKDDYRKKGSPTGGPRRRVLDDDVEDTSELDVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISDGEILGYLYAKGIKPDGVQTLDKDMVKMICKEQGVEVIDADPIRVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYRVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIVVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPDRSAKGTVVEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAFGKVRALFDDVGKRVDSSAPSIPVQVIGLNNVPMAGDEFEVINSLDAAREKAESRAESLRNERISAKAGDGKVTLSSLASAVSSGRLSGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVRVPGSVKSHAENKLVEIRSYKVIYDLIDDVRNAMEGLLEPVEDQVTIGSAEVRATFSSGSGRVAGCMVNEGKVTKDCGIRVIRKGKVVHVGVLDSLRRVKESVKEVSAGLECGIGLEEYDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVEGVGVE 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0522 1011 MobiDBLite consensus disorder prediction 74 111 - -
Lele09g0522 1011 MobiDBLite consensus disorder prediction 251 271 - -
Lele09g0522 1011 CDD IF2_mtIF2_II 663 757 IPR044145 -
Lele09g0522 1011 Hamap Translation initiation factor IF-2 [infB]. 7 992 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele09g0522 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 659 IPR027417 -
Lele09g0522 1011 Pfam Elongation factor Tu GTP binding domain 488 648 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 MobiDBLite consensus disorder prediction 74 95 - -
Lele09g0522 1011 SUPERFAMILY Translation proteins 659 742 IPR009000 -
Lele09g0522 1011 Gene3D Translation factors 897 993 - -
Lele09g0522 1011 SUPERFAMILY Translation proteins 898 992 IPR009000 -
Lele09g0522 1011 CDD IF2_eIF5B 486 652 - -
Lele09g0522 1011 Gene3D - 480 658 IPR027417 -
Lele09g0522 1011 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 790 902 IPR036925 -
Lele09g0522 1011 TIGRFAM IF-2: translation initiation factor IF-2 405 994 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele09g0522 1011 Gene3D Translation factors 659 775 - -
Lele09g0522 1011 CDD mtIF2_IVc 902 984 - -
Lele09g0522 1011 MobiDBLite consensus disorder prediction 317 355 - -
Lele09g0522 1011 PRINTS GTP-binding elongation factor signature 487 500 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 PRINTS GTP-binding elongation factor signature 539 549 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 PRINTS GTP-binding elongation factor signature 555 566 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 PRINTS GTP-binding elongation factor signature 591 600 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 FunFam Translation initiation factor IF-2 896 993 - -
Lele09g0522 1011 Coils Coil 742 769 - -
Lele09g0522 1011 FunFam Translation initiation factor IF-2 480 658 - -
Lele09g0522 1011 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 483 656 IPR000795 GO:0003924|GO:0005525
Lele09g0522 1011 MobiDBLite consensus disorder prediction 176 208 - -
Lele09g0522 1011 FunFam Translation initiation factor IF-2 791 896 - -
Lele09g0522 1011 MobiDBLite consensus disorder prediction 231 245 - -
Lele09g0522 1011 Gene3D - 791 895 IPR036925 -
Lele09g0522 1011 MobiDBLite consensus disorder prediction 326 353 - -
Lele09g0522 1011 FunFam Translation initiation factor IF-2 659 777 - -
Lele09g0522 1011 MobiDBLite consensus disorder prediction 163 293 - -
Lele09g0522 1011 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 171 1000 IPR015760 -
Lele09g0522 1011 ProSitePatterns Initiation factor 2 signature. 945 967 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele09g0522 1011 TIGRFAM small_GTP: small GTP-binding protein domain 485 646 IPR005225 GO:0005525
Lele09g0522 1011 Pfam Translation-initiation factor 2 791 884 IPR023115 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0522 Lele-ChrLele09 3875447 3882076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0522 465 882 Eukaryotic Initiation Factors Gene Family AT1G76810 28.980 2.21e-28 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0522 09 3875447 3882076 Lele09g0522 09 3875447 3882076 ECH
Lele09g0522 09 3875447 3882076 Lele11g0527 11 5219898 5230934 hybridization
Lele09g0522 09 3875447 3882076 Lele12g0794 12 15990318 15996928 hybridization