Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0520 ATGAATTCCGATCAATCAATGTTATCGACTTGTCCTATTCTCTCTGCTGTTGCATTTGAGCTGTATTCGATAGAGTTGATTCGCTTTCTTGAATGCAGATTTAGGAATCCTTGGAGGAGAAAACCGGACCTTGATCTAGAGGAATTCAACTTCATGGTTTTTGATCAGATTGGAGACGGTGCGTTCAACAAGGTTTACTGGATTCTTAACAGAGATTTGAAACCGCAGAATATACTCGTTAATTGCTCTGCCCAATTAATCAAGCTAGCCGATTTCAATTTGGCCTGTGCATTTGAAGCTCCTGAGCAATATTTTACTGACTTGGCAGCAAAGTTCCTCGGTTTGAACCAAGATGGCCTTGATCTTCTTTCTTTATACACATTGAAAACGAATGAAGAAAATGTATTAGATCCAAAGGAAAGTTTAAATAAGGACAATAAAACTATGTGTAGCACAATTTCTTGCCATTTTCACTGGCAATTTGTTTTTTTCACCATAGAGAATGCTTTGTCTGGACCCAGGTCGAAGGATTTCAGCTGA 540 0.3852 MNSDQSMLSTCPILSAVAFELYSIELIRFLECRFRNPWRRKPDLDLEEFNFMVFDQIGDGAFNKVYWILNRDLKPQNILVNCSAQLIKLADFNLACAFEAPEQYFTDLAAKFLGLNQDGLDLLSLYTLKTNEENVLDPKESLNKDNKTMCSTISCHFHWQFVFFTIENALSGPRSKDFS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0520 179 SUPERFAMILY Protein kinase-like (PK-like) 67 104 IPR011009 -
Lele09g0520 179 Gene3D Transferase(Phosphotransferase) domain 1 61 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0520 Lele-ChrLele09 3864448 3867614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0520 45 106 Core Cell Cycle Gene Families AT1G18040 40.323 1.33e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele09g0520 None None None