Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0519 ATGGGTGAATTCGTTCAAAAGGTCACGAGTTTCTGCGAATCTGTGTTGATGTGGTGTTCGAAATGGGGAATTGGGAATCACTCGAACGTGTTGGTACCCAATTTAGAGGAATTACACTACTATGTTATTGACGAGGTACTGAGAGATCCACAGATAAAAGTGTTTCTTCAGCAGATAGTCTCTGCTGTAGAACATTATCATTCTTATGAGATTATCGTGGGAGTTATAAAACCACAATTCCTACAACTGAACAACACTGAGAGTTCAATCAAGCTAGCATTTGGAGATCCTTGGGCATCTTATCCTACAAAAAGCTCCCAGTACAGTGCTCCTGAACTTCTTTTTGGATCACGTCGATATTCAAAAGCAGCTGATATGTGGTCTGCTGGTTGTATATTTGGAGAGATGAATCTGGCAGAAAACTTCCCTGGTTTGGAACCAGAAGGCATTGATCTTCTTTCCAAAATGCTTTGCCTTAATCCAGAAGAAAGAATTTCAGCTGAAGATGTTCTAAAGCATGAATACTTCAATTCCAGGGAGAGTCCGAGGATTCATGAGACGTGGAGGATTGCACAGAGCAAGCTGCGCATGTTACAAGCAATGGATGAGATGACCAGCTTTAGTGCTCCAGATCGAATGTGTTTCTCGTATTAA 654 0.4144 MGEFVQKVTSFCESVLMWCSKWGIGNHSNVLVPNLEELHYYVIDEVLRDPQIKVFLQQIVSAVEHYHSYEIIVGVIKPQFLQLNNTESSIKLAFGDPWASYPTKSSQYSAPELLFGSRRYSKAADMWSAGCIFGEMNLAENFPGLEPEGIDLLSKMLCLNPEERISAEDVLKHEYFNSRESPRIHETWRIAQSKLRMLQAMDEMTSFSAPDRMCFSY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0519 217 SMART serkin_6 2 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0519 217 SUPERFAMILY Protein kinase-like (PK-like) 38 179 IPR011009 -
Lele09g0519 217 PANTHER CELL DIVISION PROTEIN KINASE 43 143 - -
Lele09g0519 217 Pfam Protein kinase domain 44 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0519 217 Gene3D Transferase(Phosphotransferase) domain 1 35 139 - -
Lele09g0519 217 Gene3D Transferase(Phosphotransferase) domain 1 142 182 - -
Lele09g0519 217 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0519 Lele-ChrLele09 3856321 3858302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0519 52 178 Core Cell Cycle Gene Families AT3G48750 30.645 2.57e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lele09g0519 Pkinase 5.1e-12 CL0016