Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0516 ATGGAGGATATAGGGTTGTTTAAACAAGGTTGGCAATGGCTTCGATCGCAGAAGGATGCTTACTGGCGTGCCCGAGCCGCGTTGAGTTGTTGCAGGGACAAAACTGCCATGTTCATCGATCAACATTGGCCGTTAGTATGCAGTGCTTGCTTCAGATTGGGAAGCATTCTTCGCCTATCGTTGCTTTATTGGAAAGACTGTTTTGTGAGGGGCTTTCAGTCGTTCATCAAGCTGGGTCCAGCTATGCTTCTCCTCATAATGTGGTGTTGTCTTCTTAGTTTGACCTCGATGCATTGCTTGATTTATGTACTTATTAGTATGGGTGTTGCTGGAGCTGCTATTCAGTACTTGGGTTATACACCTGGCGTCTTCATTGTAGGGCTTTTTGCTATCCTTATGTTGTGGATGTATGCTAACTTCTGGATAACAGGAACATTGCTTATTGTTGGAGGTTATTTATTCTCCCTAAATCATGCACGCTTGGTGGTACTAATGGCAACCGTGTATGCTTTATACTGTGTCAAAGTTCAAGTTGGATGGCTCGGTGTTTTTCTGTGTGTAAACCTTGCATTCTTGTCCAACGACATTTTGAATTTCCTCCTCCAATGGTTTGATAATGTGAGTGAAAGCAGCTCACATTCTGAAGACCAGAGACAAGCAGAAACAGTTCTGGGAGATGACTTTACTGAAGAGTGTGAATATCCCATTCCTACTGCTGAATCTGAAAATTCACATTCATGTAAATCATCCAGCAAACCCGCTGTTACCACTTCAGTTGTTGAAAACAAGAAAGAGTTTTCAGATAGCAAAGTGGTGAAAGTACAAGCAGATTCTGTTGATGAAATGAGGAGAATATTGAATAGTCTTGATCATTATGATGCGCTTGGATTTCCCCGTCACAAGAAAGTTGATGCAGCAATTTTGAAAAAGGAATACCGGAAAAAGGCGATGCTTGTTCATCCTGATAAGAATATGGGCAGTCCGCTGGCAAGTGAATCATTTAAGAAGCTTCAATGTGCATATGAGGTTCTTTCTGATACCACAAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAGGAATTCAGGGTTAAAAGTGTCTGCCAGAAATCCTATGGTGCTTCACGTCAGGACAATTCTGAGTATCGCTCTGAAGAATCCAGGCGTATACAGTGCACCAAGTGTGGCAATTCACATGTATGGGTATGCACTAATAGAATTAAGTCGAAGGCTAGATGGTGTCAGGACTGTGGTCAGTATCATCAAGCCAAGGATGGAGATGGATGGGTTGAGTACAAAGGTTCTCTGGCTTTTGAGAGGGCTCAAAAGATGGAGATTCCTCGCGCTTTTGTTTGTGCGGAGAGCAAGATCTTTGATGTATCAGAATGGGCCATTTGTCAGGGAATGGCTTGTAGGCCAAACACCCATAGGCCGAGCTTCCATGTGAACATGGTTGGCCTGGAGGAAAGCCCGCGGTGTAACTCCAGCCGGTATCCATGGGATTTGGATGCCGAAATGATGCTCGACGAAGACGAAGAGGCATTCGAGCTTTGGCTTCAGCAGGCTCTCGCCTCTGGCTTCTTCTGTGAGACCTCCAAACGCCGGAAGAGCTGGAGTCCCTTCAAATTGCATCAGAAGAAAGGGAAGAAGCAGTGGCGAAGAACATCGTGCTGA 1674 0.4456 MEDIGLFKQGWQWLRSQKDAYWRARAALSCCRDKTAMFIDQHWPLVCSACFRLGSILRLSLLYWKDCFVRGFQSFIKLGPAMLLLIMWCCLLSLTSMHCLIYVLISMGVAGAAIQYLGYTPGVFIVGLFAILMLWMYANFWITGTLLIVGGYLFSLNHARLVVLMATVYALYCVKVQVGWLGVFLCVNLAFLSNDILNFLLQWFDNVSESSSHSEDQRQAETVLGDDFTEECEYPIPTAESENSHSCKSSSKPAVTTSVVENKKEFSDSKVVKVQADSVDEMRRILNSLDHYDALGFPRHKKVDAAILKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYEVLSDTTKKRDYDEQLRKEEFRVKSVCQKSYGASRQDNSEYRSEESRRIQCTKCGNSHVWVCTNRIKSKARWCQDCGQYHQAKDGDGWVEYKGSLAFERAQKMEIPRAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEESPRCNSSRYPWDLDAEMMLDEDEEAFELWLQQALASGFFCETSKRRKSWSPFKLHQKKGKKQWRRTSC 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0516 557 CDD DnaJ 290 346 IPR001623 -
Lele09g0516 557 SUPERFAMILY Chaperone J-domain 265 353 IPR036869 -
Lele09g0516 557 Pfam DnaJ domain 290 354 IPR001623 -
Lele09g0516 557 Pfam Cleavage inducing molecular chaperone 386 483 IPR032843 -
Lele09g0516 557 SMART dnaj_3 289 349 IPR001623 -
Lele09g0516 557 PRINTS DnaJ domain signature 312 327 IPR001623 -
Lele09g0516 557 PRINTS DnaJ domain signature 329 349 IPR001623 -
Lele09g0516 557 ProSitePatterns Nt-dnaJ domain signature. 334 353 IPR018253 -
Lele09g0516 557 Gene3D DnaJ domain 276 377 IPR036869 -
Lele09g0516 557 ProSiteProfiles dnaJ domain profile. 290 357 IPR001623 -
Lele09g0516 557 PANTHER OS03G0832900 PROTEIN 1 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0516 Lele-ChrLele09 3838322 3844043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0516 1 556 Miscellaneous Gene Families AT1G16680 69.231 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0516 09 3838322 3844043 Lele11g0521 11 5176123 5188749 hybridization
Lele09g0516 09 3838322 3844043 Lele12g0798 12 16026658 16052728 hybridization