Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0512 ATGAGCAGCATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGCGATTACTTAATGAAGAAGGTTACACACTGTGACTTCTCTCTCATGATTGATGTTGATCTTAACAAGTGCGAACCATGGGACATTCCTGAGGCAGCGTGTGTAGGAGGGAAAGAGTGGTATTTCTACACGCAGCGAGACCGCAAATATGCGACTGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACAGGGAAGGACAGGCCTATCCGTCGCAAGGGCACCCTTGTTGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGAGCACCAAAAGGGGGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCTTGGCCCTCCTAAACTTTCTTCAGCCAAGGAGGATTGGGTTCTGTGCAGGGCGTTCCTCAAAAACAAAGAATCTTCAGCCAAACAGAGCATCGGAAGCTGCTATGACGACACAGGATCTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGACCAACAGGCTCAAGCTCAAACTCATCAAGATGACTACGAGCAAGTGCCCTGCTTCTCCATTTTCTCGCAGATCCATACAAACCCTAGCTTCAACCACACAAACAGTACAAGCACCATGGAGCCAAATTTAGTAGTACCTGTCAAGAACCACAACAATGTGACCACCACATACGGCGGAGGAACGACGCCGTACGATCTGGATTCTTCTTGCTTGGAACCTAATTTGAATTTCGATGGTACTAGTAGGAAGGTATTGAGAGCTTTCGTGGATCAGCTCACAAAGATTGAGAAAAATCAACAAAGCCAAATTACTACTCTCAAAGGTTCACCAAGCTTAGGGGAAGCAAGTTCTGAGAGTTTTTTATCTGATGTGTGCATGCCCAACTTGTGGAACAATTTCTGA 975 0.4677 MSSISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDFSLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPIRRKGTLVGMRKTLVFYQGRAPKGGKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFLKNKESSAKQSIGSCYDDTGSSSLPALMDSYISFDQQAQAQTHQDDYEQVPCFSIFSQIHTNPSFNHTNSTSTMEPNLVVPVKNHNNVTTTYGGGTTPYDLDSSCLEPNLNFDGTSRKVLRAFVDQLTKIEKNQQSQITTLKGSPSLGEASSESFLSDVCMPNLWNNF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0512 324 FunFam NAC domain-containing protein 100-like 20 162 - -
Lele09g0512 324 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Lele09g0512 324 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Lele09g0512 324 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Lele09g0512 324 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Lele09g0512 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0512 Lele-ChrLele09 3808944 3812966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0512 2 322 NAC Transcription Factor Family AT1G56010 58.133 7.75e-124 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0512 NAM 3e-36 No_clan