Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0504 ATGCATCATATCGAATTTTCTCAGGAAAAAGAGGTGGATCCTTGTTCTTTATTCCCAGAACTTTGCACAGAGAAAATATCTTCATCATCTTCTTCGTCTTTCGGTGTTGAAATTACTGCTGCGAATCATCGTCATGAATTAGCAGATCATAAGACACTGTATCATCAACAAACTGAGACTAGTTCGTTTACTCCTCTCAGTTTCTCTGAGGCTTCTCCTCATTCATTTTCTTACATGGATGGAAATGATCTTCATGTTGATGCTGAGAACAAGGGCCAATCAGAAGGAGACAAGTGGCTTAGACGAAGCAGCAAAAAGACTTCTTTACCCCTTCCACAACACATAGTAGTTGAGAGAAAACGAAGACGAGAACTTAACCAGAAGTTCTTGGCTCTCTCAAAAGTGGTGCCTGGCAATAAGAAGAAGGATAGAGCTTCAATAGTTGGAGAAGCAGTGAAATACATGGAAGATCTTCAAGAACGCATCAAGAAGCTGGAGGAGAAGAACAAGAAGAAAGTGGTTGAATCCGTGGTTTTTATGAAGAGTTCGTCGTCGTCGTCGTCATTATCATCTTCTTCTTCCCCATCTAGTAGCAGCAATCAATATCATCATTATAACAGTGATAAAGGAGATTATTGCAGTAACCCTAGTTACGACGAGGAAGAAGAAGAAATAATCCAAGCAAAAGTGATAGAAAGGAGTGTGCTTATTCGAGTTCATTGTGGGAATCATCACAACGACGAGATCCTTCCAACGTTGTTGTCTGCAATTTCAGAGCTTCATTTGATTGTGCTCACTGCCAATGCTATTCCCTTTGGGAATCACATCGACATCACTGTCATTGCTCAAACGAAGGATATTGTGGAGCACTTGCGCCTGGGATTACCAAATTTCATTTGA 900 0.4067 MHHIEFSQEKEVDPCSLFPELCTEKISSSSSSSFGVEITAANHRHELADHKTLYHQQTETSSFTPLSFSEASPHSFSYMDGNDLHVDAENKGQSEGDKWLRRSSKKTSLPLPQHIVVERKRRRELNQKFLALSKVVPGNKKKDRASIVGEAVKYMEDLQERIKKLEEKNKKKVVESVVFMKSSSSSSSLSSSSSPSSSSNQYHHYNSDKGDYCSNPSYDEEEEEIIQAKVIERSVLIRVHCGNHHNDEILPTLLSAISELHLIVLTANAIPFGNHIDITVIAQTKDIVEHLRLGLPNFI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0504 299 Coils Coil 148 175 - -
Lele09g0504 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 109 158 IPR011598 GO:0046983
Lele09g0504 299 MobiDBLite consensus disorder prediction 184 218 - -
Lele09g0504 299 PANTHER BHLH TRANSCRIPTION FACTOR 33 294 - -
Lele09g0504 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 177 IPR036638 GO:0046983
Lele09g0504 299 MobiDBLite consensus disorder prediction 184 213 - -
Lele09g0504 299 Pfam Helix-loop-helix DNA-binding domain 114 159 IPR011598 GO:0046983
Lele09g0504 299 SMART finulus 115 164 IPR011598 GO:0046983
Lele09g0504 299 Gene3D - 112 178 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0504 Lele-ChrLele09 3754661 3756323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0504 86 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 31.441 5.12e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g0504 HLH 1.6e-09 No_clan