Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele09g0496 | ATGGCGAAACCTGGGCGAGGCCGTCGCTCACCGCCGTCGGGTTCCATCTCGGGCTCCTCATCACGCTCTAGGTCTTCCTCTCCCTCCGATTCCCGCTCTCCCTCTCGCTCCAGATCCTTCTCCTCGTCCTCTTCTCCTTCCCGCAGTGTCAGTTCCGGGAGCCGAAGTCCACCTCCTCCAAGGAGGAAAAGTCCTGCTGAAGCAGCTAGGAGAGGTAGATCTCCTCCTCCCCAATCTAAAAGGATATCTCCACCTCCTAGGAAACCTTCTCCTGTTCGTGAATCACTTGTTCTTCACATAGATAAACTGAGCAGGAACGTCCATGAAGGCCATTTGAAAGAAATATTTAGTAACTTCGGTGAGGTTGTAAATGTGGAGTTGGCAATGGATCGAACTGTTAACCTTCCTAAAGGATATGGATATGTAGAATTCAAGACAAGAGGGGATGCTGAAAAAGCCTTACTATACATGGATGGGGCCCAGATTGATGGTAATATTGTTAAGGCCAGATTTACCTTGCCGCCAAGGCAGAAGGTTTCTCCACCCTCAAAGGCTCCTGCTCTTGCTCCAAAGAGAGATGCTCCTAGAGCTGATAATGCCAGTGCAGATGCTGAAAAAGATGGCCCAAAGAGGCAAAGAGAATCTTCTCCTAGGAGAAGACCTCCTTCACCACGAAGGAGATCTCCTGTGCCTCGAAGAGTTGGATCACCAAAGCGACTGGATTCTCCTGTTCGTCGTCGAATGGACTCACCCTATCGTCGTGGAGACACGCCTCCTAGGAGGAGGCCTGTCTCCCCCGCAAGAGGCAGATCTCCAACTCCACCAAGGCGCCTTAGATCCCCTGCAAGGGTCTCACCTAGAAGGATGCGTGGAAGTCCAATTCGCAGGCGTTCTCCTCCTCTAACGCGGCGTTCACCACCTAGACGAGTTCGTAGTCCTAGAAGGTCTCCAATCAGTCGGAGACGTAGTCGCTCTCCGCCACGGAGGTCTGCACGCTCACGCTCAAGATCATTCTCACCACCACCTCGGAGAGGACGGCCACCTATGAGACGTGGCAGATCATCATCATCCTACTCTGATTCACCAAGTCCTCACAAGGCATCCCGGAGATCAAGGAGTCGCAGTCCAAGAAGGCCTTTGAGAGGAAGAGGAAGTAGCAACAGCAGCAGCAGCAGCTCACCACCCCCAGCTCGCAGACCGTAG | 1203 | 0.5312 | MAKPGRGRRSPPSGSISGSSSRSRSSSPSDSRSPSRSRSFSSSSSPSRSVSSGSRSPPPPRRKSPAEAARRGRSPPPQSKRISPPPRKPSPVRESLVLHIDKLSRNVHEGHLKEIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRGDAEKALLYMDGAQIDGNIVKARFTLPPRQKVSPPSKAPALAPKRDAPRADNASADAEKDGPKRQRESSPRRRPPSPRRRSPVPRRVGSPKRLDSPVRRRMDSPYRRGDTPPRRRPVSPARGRSPTPPRRLRSPARVSPRRMRGSPIRRRSPPLTRRSPPRRVRSPRRSPISRRRSRSPPRRSARSRSRSFSPPPRRGRPPMRRGRSSSSYSDSPSPHKASRRSRSRSPRRPLRGRGSSNSSSSSSPPPARRP | 400 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 380 | 400 | - | - | |
Lele09g0496 | 400 | SMART | rrm1_1 | 97 | 170 | IPR000504 | GO:0003723 | |
Lele09g0496 | 400 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 96 | 174 | IPR000504 | GO:0003723 | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 12 | 57 | - | - | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 301 | 331 | - | - | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 238 | 263 | - | - | |
Lele09g0496 | 400 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 100 | 166 | IPR000504 | GO:0003723 | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 173 | 400 | - | - | |
Lele09g0496 | 400 | PANTHER | RIBONUCLEIC ACID BINDING PROTEIN S1 | 2 | 254 | - | - | |
Lele09g0496 | 400 | SUPERFAMILY | RNA-binding domain, RBD | 82 | 180 | IPR035979 | GO:0003676 | |
Lele09g0496 | 400 | Gene3D | - | 13 | 181 | IPR012677 | - | |
Lele09g0496 | 400 | CDD | RRM_RNPS1 | 98 | 170 | IPR034201 | - | |
Lele09g0496 | 400 | FunFam | Serine/arginine-rich splicing factor SR45 | 3 | 181 | - | - | |
Lele09g0496 | 400 | MobiDBLite | consensus disorder prediction | 196 | 221 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele09g0496 | Lele-ChrLele09 | 3690850 | 3695307 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele09g0496 | 98 | 171 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 29.730 | 2.01e-07 | 51.2 |