Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0487 ATGGGTGGCGAAGAAGATCAATTGAGGAAGAAGGAAGAGTTTATGGAAGACGATGATTATGATGATGAAGTTGAACTTCCAGGGTTTCGGTTTCATCCCACAGACGAAGAACTCGTTGGTTTCTATCTTCGAAGGCAGCTCGACAAGAAACCAATCAGAATCGAACTCATCAAGCAGATCGATATCTACAAATACGACCCTTGGGACCTTCCAACACACACACATGTATATGTGCGCGTAAAAGCATATGGAGATGTTAACAATGTAATGAATTCGTATATATCAGAAGCGAGCTGCACAGGAGGGGAGAAGGAGTGGTACTTTTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGCGTAAGGCCGAATAGAGTGACAGGATCAGGGTTTTGGAAAGCTACAGGGATAGACAAGCCTGTGTATTCTCTTGCAGGACAAGGCAGTGATTGCATTGGCCTCAAGAAAACTCTTGTTTACTACAGAGGCAGTGCAGGTAAAGGCACTAAAACTGATTGGATGATGCATGAGTTTCGCCTCCCTTCTCATCAAGACGACGTGCCCGCCTCCAACACCAGCACCACCTCCACCCCCATGGCCCAAGAAGCCGAAATCTGGACACTGTGTAGAATTTTCAAGAGAAATGTTCCACCGAGAAAGCACTTAACAGACTGGAGATCATCACAACACGCAGGTACCAAACGCCAATATTCTTCAGTAGTCAACAAGAATAACACATCATCGAGGCTTATTACAAGCACTGTGGAGAGTGATCATCATACTAACTACTACAACGATAACAAAGAAGCTTACATCAATTTTGGAGGAAGCAATACTGATCATCATCATCATCATCATCCTGGACATTATTATTATTCTCAGGTTGATCATTATCGTCATCATCATGAGGAGAAACCAGCAGTCTTCGATAATACTAACATTGATCAAAGGAATAATAATAATCAGTTCATGATGATGATGAACTCCCAGCAAGCAGCAGCAGCACAACAACAACAACAACCGCCACAATTATTCACTGCTTCATCTTCATCTTCTTCTTCTAACTTGTGGATTAATCATAACCCTAATTCTGCTGCTGCAAACGACTTCCTCACCTATGAGAACTGGGATGAACTTGGATCAGTCGTCAAGTTCGCTCATGATTCCTCTATCATGTAA 1176 0.4294 MGGEEDQLRKKEEFMEDDDYDDEVELPGFRFHPTDEELVGFYLRRQLDKKPIRIELIKQIDIYKYDPWDLPTHTHVYVRVKAYGDVNNVMNSYISEASCTGGEKEWYFFCKRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSLAGQGSDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSHQDDVPASNTSTTSTPMAQEAEIWTLCRIFKRNVPPRKHLTDWRSSQHAGTKRQYSSVVNKNNTSSRLITSTVESDHHTNYYNDNKEAYINFGGSNTDHHHHHHPGHYYYSQVDHYRHHHEEKPAVFDNTNIDQRNNNNQFMMMMNSQQAAAAQQQQQPPQLFTASSSSSSSNLWINHNPNSAAANDFLTYENWDELGSVVKFAHDSSIM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0487 391 Gene3D NAC domain 34 215 IPR036093 GO:0003677|GO:0006355
Lele09g0487 391 Pfam No apical meristem (NAM) protein 27 179 IPR003441 GO:0003677|GO:0006355
Lele09g0487 391 ProSiteProfiles NAC domain profile. 25 213 IPR003441 GO:0003677|GO:0006355
Lele09g0487 391 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 329 - -
Lele09g0487 391 SUPERFAMILY NAC domain 25 213 IPR036093 GO:0003677|GO:0006355
Lele09g0487 391 MobiDBLite consensus disorder prediction 331 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0487 Lele-ChrLele09 3597321 3599384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0487 22 213 NAC Transcription Factor Family AT5G39820 51.980 3.22e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0487 NAM 3.2e-33 No_clan