Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0484 ATGGGAGAGGTAGGTAGATCAAAGCAAGGTACAATGTCGCCATGTGCAGCGTGCAAGCTTCTGCGAAGAAGATGTGCACAGGACTGTGTATTTGCTCCTTATTTTCCAGCAGATGAACCCCAGAAATTTGCCAGTGTTCATAAGGTTTTTGGGGCTAGTAATGTCAACAAAATGTTACAGGAACTACCAGAGCATCAACGTAGTGATGCAGTGAGTTCAATGGTGTATGAAGCAAACGCAAGAGTGAGAGATCCTGTTTATGGGTGTGTTGGAGCCATATCCTCTCTGCAGCACCAAGTTGATGTTCTTCAAACCCAACTTGCTCTCGCTCAGGCCGAAGTTGTTCACATGAGATCACTGAGTCATCAGTTGTCTCCTTCATCATCATCACCACCACCACCACCACCACCAACAGTGACGACGGTGCCTAATTCCAGTTCATCACCAGATCACCATCATCACAGTCGCTTCAATAACATTATGTCTCCTTCATCGTCAAGCAGGCTAAGTGCCAAGTCCTTTTTTGCCATGGACGTGGCCGAGTCTTTGTGGTCCTGCTAG 561 0.4706 MGEVGRSKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLALAQAEVVHMRSLSHQLSPSSSSPPPPPPPTVTTVPNSSSSPDHHHHSRFNNIMSPSSSSRLSAKSFFAMDVAESLWSC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0484 186 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 150 - -
Lele09g0484 186 Coils Coil 93 113 - -
Lele09g0484 186 MobiDBLite consensus disorder prediction 127 142 - -
Lele09g0484 186 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lele09g0484 186 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Lele09g0484 186 MobiDBLite consensus disorder prediction 120 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0484 Lele-ChrLele09 3560775 3564705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0484 8 118 AS2 family AT1G31320 90.090 1.46e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele09g0484 LOB 1.4e-43 No_clan