Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0477 ATGATGTCGATGCTCAGAAGAAAAAAGATCATCAATTTGTTTTCAAGTTATAAACTTTCCCAGTTAATTTCTCATGAATCTGGTTTGATTCATCAGTCATTGCAATATCCTGCGTACCCTTCTTCTGTTTTCCTCAAAACCCTGAACCCTTTTAGGGTTCTGCTATACTATGCTTCGTATTCAACGCAGGCGTCCAAATTTCCCGAGTATGAGATGCCCTCTGTTACCTGGGGTGTGATTCAGGGACGGAAAGAGAAGCTTGTTTCCAGGGTTATCATATTTGATTATCTAAAGGGTTTAGGAATCATTCCAGATGAATTGCATGACCTGGAGATACCTTCCACCGTTGAGGTCATGAGAGAGCGAGTTGAGTTTCTTCAGAAGTTGGGCTTAACCATTGATGACATCAATGAGTATCCTTTGATGCTGGGATGCAGTGTGAGAAAGAATATCATACCGGTATTAGGGTACCTAGAAAAAATTGGGATCCCAAGGTCAAAGCTTGGTGAATTCATAAAAATGTACCCACAAGTTTTACATGCGAGTGTAATTGTCGAGCTAGCTCCGGTTATTAAGCTACTAAGAGGACTTGATGTGGAGAAACAGGACATTGGATTTGTGTTGCAAAAGTATCCTGAGCTCTTGGGGTTCAAGCTTGAGGGTACAATGAGTACTTCAGTGGCTTATCTTGTTAGTATCGGTGTCAATCCGAGAGATATCGGTCCCATGGTGACACAGTACCCTTATTTTTTGGGGATGAGAGTTGGGACTGTGATTAAACCTTTGATTGATTACTTGGTCTCTTTAGGGCTGCCCAAGAAAATTATAGCTAGGATGTTGGAGAAGAGACCCTATATACTTGGTTATGATCTTGAGGAGACGGTTAAACCTAATGTGGATTGTTTGATTAGTTTTGGAATTAGGAAGGAATCAGTGCCTTTAGTTATTGCTCAGTATCCGCCGATTCTCGGGCTGCCTCTTAAGGCTAAGTTGTCTTCACAGCAGTACTTCTTCAGTTTGAAGCTTAAGATTGACCCCGAAGGATTCGCAGGAGTGATAGAGAAGATGCCACAGGTGGTTAGCCTTAATCAACATGTGATAATGAAACCGGTTGAGTTCCTCCTTGCGAGGGCGATACCGTCGCGTGATGTGGCCAATATGGTGATCAAATGTCCTCAATTAATAGCAGCAAGAGTTGAGCTTATGAAGTACAGTTTTTACTTCTTCAAGAGTGAGATGGGGAGACCTATAAAAGAACTTGTGGAGTTTCCAGAATACTTTACGTATAGCTTGGAATCCCGGATCAAACCCAGATACCAGAGGATGAAAAGCAAGGGGATAAGGTTTTCATTAAATTGGATGCTAAATTGTAGTGACCAGAGATTTGAAGAGAGATTGCAAGGTAATTACATTGAAACTGAAACTACAGGTCCATCGTTCTGCTTGGGTGGGAGATTAGAGCTACCAGGTAATGAGATAATGTCAGACGAGGAAGAAGAGAACGATGACGAAGAACTACATAGACGAACTGTTTCTCTTTAG 1542 0.417 MMSMLRRKKIINLFSSYKLSQLISHESGLIHQSLQYPAYPSSVFLKTLNPFRVLLYYASYSTQASKFPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELHDLEIPSTVEVMRERVEFLQKLGLTIDDINEYPLMLGCSVRKNIIPVLGYLEKIGIPRSKLGEFIKMYPQVLHASVIVELAPVIKLLRGLDVEKQDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTVIKPLIDYLVSLGLPKKIIARMLEKRPYILGYDLEETVKPNVDCLISFGIRKESVPLVIAQYPPILGLPLKAKLSSQQYFFSLKLKIDPEGFAGVIEKMPQVVSLNQHVIMKPVEFLLARAIPSRDVANMVIKCPQLIAARVELMKYSFYFFKSEMGRPIKELVEFPEYFTYSLESRIKPRYQRMKSKGIRFSLNWMLNCSDQRFEERLQGNYIETETTGPSFCLGGRLELPGNEIMSDEEEENDDEELHRRTVSL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0477 513 FunFam Transcription termination factor mterf4, chloroplastic 119 256 - -
Lele09g0477 513 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 313 345 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 350 380 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 385 416 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 107 132 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 417 448 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 PANTHER CGI-12 PROTEIN-RELATED 154 467 IPR003690 GO:0003690|GO:0006355
Lele09g0477 513 FunFam Transcription termination factor MTERF4, chloroplastic 257 471 - -
Lele09g0477 513 MobiDBLite consensus disorder prediction 494 513 - -
Lele09g0477 513 Gene3D Transcription termination factor 3, mitochondrial 258 473 IPR038538 -
Lele09g0477 513 Gene3D Transcription termination factor 3, mitochondrial 120 257 IPR038538 -
Lele09g0477 513 Pfam mTERF 155 463 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0477 Lele-ChrLele09 3526636 3528177 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele09g0477 mTERF 2.5e-104 No_clan