Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0467 ATGTCTTCATCTGTTATCACATTCAAGCCATACCACAAGCACACTCCTCGTCCCATGGCCTCCTCCTCCACCCTCTTGTCTTCTAACCCTAGGGTTTTCTCTTCCACCATCTCCGATCATCATCATCAACATCAATTTTGTCCTCTCTCTCAACCTCCCACCATCCCCAAATCCTTCAGTGGCCTCTGCAAACCTTTCCATTCTCGAGTTCCCACTTCGATTCGCCGTCGAGGCTTCTTCGTCAAGCTTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGTGACACTGATTACCAGAAAAAAGTCCTATATCTAGAGTCTATTGGTATTGACTCTTTCTCACTCATTGAAAATCATCCAAGCATCATCTCTGCCTCCTCTCTTCCTGAAATAAAATCCACTGTAGAATTCTTGACATCCATGGACTTCTCTGCAATTGAGTTCCGGCGCATTGCTGGCATGTGCCCAGAGATTCTCACATCCAGAGTATCAGATATTTTACCTGTCATCACCTTCCTGATCCGGGAAGCTCGTGTGAATGGGTCAGATATCAAGCATGTCATAAACCGTCGTCCCAGGTTGATTGTCTGCAGTGTTACTGAGCAACTTCGTCCCACCCTGTACTTTCTCCAAACCATTGGCATTGCAGAAGTAAACAGGCACACCTACTTGCTATCATGCAGTGTTGAAGAAAAGCTTATTCCTAGGATTGATTACTTTGAGAATATCAGTTTTTCACGCCGTGACGCAATTTCAATGTTCCGAAGATTTCCTCAGCTGTTTAACTATAGTATTAAGAACAATTTGGAGCCTAAATACAAGTACTTTGTGGTGGAAATGGGGAGAGATTTGAAGGAACTGAAAGAATTCCCCCAGTATTTCTCATTTAGCTTAGAGACTAGAATCAAACCTAGGCATAAACTATGTGTAGAAATGGGAGTTTGTTTTCCTCTCCCTGTATTATTAAAGACAAATGAAGCGCAATTTCTTAAAAGATTAGATGTATGTGTAAATTCTTCAACACCCTTGAAAACATCTCCTCTATGGTGTTCAAATTGTGAAGTTGATTCAATATAG 1092 0.4212 MSSSVITFKPYHKHTPRPMASSSTLLSSNPRVFSSTISDHHHQHQFCPLSQPPTIPKSFSGLCKPFHSRVPTSIRRRGFFVKLTVIKWRCPKQILPPNCDTDYQKKVLYLESIGIDSFSLIENHPSIISASSLPEIKSTVEFLTSMDFSAIEFRRIAGMCPEILTSRVSDILPVITFLIREARVNGSDIKHVINRRPRLIVCSVTEQLRPTLYFLQTIGIAEVNRHTYLLSCSVEEKLIPRIDYFENISFSRRDAISMFRRFPQLFNYSIKNNLEPKYKYFVVEMGRDLKELKEFPQYFSFSLETRIKPRHKLCVEMGVCFPLPVLLKTNEAQFLKRLDVCVNSSTPLKTSPLWCSNCEVDSI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0467 363 FunFam Transcription termination factor MTEF1, chloroplastic 178 342 - -
Lele09g0467 363 PANTHER CGI-12 PROTEIN-RELATED 117 339 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 256 288 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 222 251 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 Gene3D Transcription termination factor 3, mitochondrial 119 342 IPR038538 -
Lele09g0467 363 Pfam mTERF 86 181 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 Pfam mTERF 187 335 IPR003690 GO:0003690|GO:0006355
Lele09g0467 363 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0467 Lele-ChrLele09 3429384 3432650 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele09g0467 mTERF 4.9e-29 No_clan