Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0462 ATGCTTCGTCTTCTATCAACTATCTCACTTCGTTTTCTGCTTGTTTCGATCGCGAAACCTTCTCAAGTATTCACTTCTGCCACCTGTTCGACAAAATGTCCAGCCCAAGTTAAGGAGGCAGCTGAAAACACAACAGATCAATCAACGGATGTTGTTCAGATTTTCAGGGAATGGGGTTGTAATGATAACGATTTGGCGAAAATTTTGAAACGTAACCCATCTTTGCGCAACTCCAATGCTGCGCTGCTTCAGTCGAAACTTGCTCAGCTAAGTCGCTACGGGCTAAAGGCACCTGACCTGGTGAGGATAATCAATTGTAGGCCTAGGTTTCTAAGCAGTAGGGTCAATCGTTATTTCGACAAGAGGCTTGCATATCTTGATTCCTTGTTTGAGTCCAAGGCATTGCTTAAGAGAGCACTTGTGACGAACCCTTCACTGTTAATCTATGATTTTGACAAAACCATTACACCTGTTCTTGCACAATATGAAGAGTTGGGTTTAAGTAAAGAGGACTTTCTTTTGATGACCTGTTCCCGGCCCACACTTATTTCAAGGACTTCTTTTAATGAGGAGAAGCTGGAATATATACGCAGGACTGGGCTATCTCCGGATTCAAAGAGGTATAAATATGTTGTATCAATAATTGGTATCTCTCGTCTGGAAACAATTTGTGAGAAGATAGCAAATTTTGCCAAATTTGGTTTCTCAGATGAAGAGATATTTGAGTTTATTGGGCGGTCTCCTTTTGTCTTGACACTGTCAATTGAAAAGGTTCAGAGGAATATGACGTTCGTATTGAGCACAATTAATTTAGAAGCGAAAATAGTTCTTAATAATCCACTTCTCTTGTTTATGAACCTAGATACCAAAATGAAACCACGGTTTCTCCTGGTGAGGAAGGTTGAAGACATGGGTTCTAAGCCTAAATGTCCACAACTTCCAATGGTTAGTGTTCTGAGGATGAGAGAAAAGAGGTTCATAAAGGCATTCATTGAATGCCACAGTAAGGAAGTGGCCAATGAGTTGTTGGAGTTCTATATGAAGGCAAAAGAAGTGAAGAGATTAGCGGAATCGTCAAGGACGTGTTTGCATGTAGGATTTCCATTTTGA 1110 0.4063 MLRLLSTISLRFLLVSIAKPSQVFTSATCSTKCPAQVKEAAENTTDQSTDVVQIFREWGCNDNDLAKILKRNPSLRNSNAALLQSKLAQLSRYGLKAPDLVRIINCRPRFLSSRVNRYFDKRLAYLDSLFESKALLKRALVTNPSLLIYDFDKTITPVLAQYEELGLSKEDFLLMTCSRPTLISRTSFNEEKLEYIRRTGLSPDSKRYKYVVSIIGISRLETICEKIANFAKFGFSDEEIFEFIGRSPFVLTLSIEKVQRNMTFVLSTINLEAKIVLNNPLLLFMNLDTKMKPRFLLVRKVEDMGSKPKCPQLPMVSVLRMREKRFIKAFIECHSKEVANELLEFYMKAKEVKRLAESSRTCLHVGFPF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0462 369 Pfam mTERF 53 144 IPR003690 GO:0003690|GO:0006355
Lele09g0462 369 Pfam mTERF 123 326 IPR003690 GO:0003690|GO:0006355
Lele09g0462 369 Gene3D Transcription termination factor 3, mitochondrial 113 342 IPR038538 -
Lele09g0462 369 FunFam Mitochondrial transcription termination factor family protein 119 340 - -
Lele09g0462 369 PANTHER CGI-12 PROTEIN-RELATED 30 335 IPR003690 GO:0003690|GO:0006355
Lele09g0462 369 SMART mt_12 273 305 IPR003690 GO:0003690|GO:0006355
Lele09g0462 369 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Lele09g0462 369 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0462 Lele-ChrLele09 3404065 3405174 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele09g0462 mTERF 4.4e-28 No_clan