Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0461 ATGGAGGTCGAGCTTTCGGAAGGAGACGAAGATCTGAAATCTTATCGGCGGTGGTTTGTGCTTCACCTCAGGATTGAAGTTCCAGATATCTCCGGCGGTGATATGGCATCTTCTCTTCTCACTCGGATGTTATTGGGTCCTCGCCTCATTCATTCTTCGAGGCCCCAAATACTCACTTCTTTCTTCAATAAGAGCTCATTTCCTTCACAAGCTGCCCCAGCCTATACTGCTCAAAAAACAAGGACAACTGGTTGGGCTCATTTTGTCATGGCTTCTTCCTCCATTAGATCACGAACTTCTTACTCGACAGTGTCTGCATCTACGTATGATCCTGTTGTTTCTGTGGATTGGCTCTATGCTAATCTTAAGAAGCCTGATTTGAAGGTGTTGGATGCCTCCTGGTACATGCCGGATGAACAGAGGAACCCAATTCAAGAATATCAGCTACCACACATGTTGCCATCAGAAGAAGCTTTTGCTGCGGCTGCTTCTGCTCTTGGCATAGAGAATAAAGATGGGTTGGTTGTCTATGATGGAAAGGGAATATTTAGTGCAGCTCGTGTATGGTGGATGTTCCGAGTTTTTGGGCATGATAGAGTTTGGGTATTAGATGGTGGCCTGCCTAGATGGCGTGCATCAGGATATGATGTGGAATCAAGTGCTTCTGGTGATGCTATATTGAAGGCTAGTGCTGCAAGTGAGGCCATAGAGACAGTATACAAGCCTACAAGGGACAAGCAGTTTTGTGTTGGATTCAACAATATACAGTCTTTTAATGTCAAGAAAAATATTGAAGAAAAAAGTCACCAACATATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGTGCCAGAACCCCGTAAGGGTATTAAAGCTGGTCATGTACCTGGCAGCAAGTGCATTGCTTTTACCCAGGTGCTGGATGCTTCACAAACATTGTTACCAGCAGATCAGCTCAAGAAGCGCTTTGATGAAGAAGGAATCTCTTTGGAAAGCCCAATAGTGGCTTCTTGTGGTACTGGAGTAACTGCTTGCGTTCTTGCATTGTTTTACAACCACAAGCTTGTCGCTTTTGTCAAAATGCTATCCCAAACACACCCTAGAGTTCTTGAGGGTCTGCATCGTCTTGGAAAATATGATGTTCCAATCTATGATGGATCTTGGACTGAATGGGGAGCACAATCTGATACACCAGTTGAAGCTTCTGAATTGCAATAA 1221 0.4447 MEVELSEGDEDLKSYRRWFVLHLRIEVPDISGGDMASSLLTRMLLGPRLIHSSRPQILTSFFNKSSFPSQAAPAYTAQKTRTTGWAHFVMASSSIRSRTSYSTVSASTYDPVVSVDWLYANLKKPDLKVLDASWYMPDEQRNPIQEYQLPHMLPSEEAFAAAASALGIENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIETVYKPTRDKQFCVGFNNIQSFNVKKNIEEKSHQHIDARSKPRFDGAVPEPRKGIKAGHVPGSKCIAFTQVLDASQTLLPADQLKKRFDEEGISLESPIVASCGTGVTACVLALFYNHKLVAFVKMLSQTHPRVLEGLHRLGKYDVPIYDGSWTEWGAQSDTPVEASELQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0461 406 CDD TST_Repeat_2 260 394 - -
Lele09g0461 406 CDD TST_Repeat_1 112 214 - -
Lele09g0461 406 ProSitePatterns Rhodanese C-terminal signature. 382 392 IPR001307 GO:0004792
Lele09g0461 406 Gene3D - 255 402 IPR036873 -
Lele09g0461 406 Gene3D - 146 228 IPR036873 -
Lele09g0461 406 SMART rhod_4 255 398 IPR001763 -
Lele09g0461 406 SMART rhod_4 113 216 IPR001763 -
Lele09g0461 406 PANTHER THIOSULFATE SULFERTANSFERASE 106 404 IPR045078 GO:0016783
Lele09g0461 406 ProSiteProfiles Rhodanese domain profile. 123 219 IPR001763 -
Lele09g0461 406 Gene3D - 105 145 IPR036873 -
Lele09g0461 406 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 109 220 IPR036873 -
Lele09g0461 406 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 260 403 IPR036873 -
Lele09g0461 406 ProSiteProfiles Rhodanese domain profile. 265 401 IPR001763 -
Lele09g0461 406 Pfam Rhodanese-like domain 116 212 IPR001763 -
Lele09g0461 406 Pfam Rhodanese-like domain 260 394 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0461 Lele-ChrLele09 3394897 3402230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0461 90 404 Sulfurtransferasese or Rhodanese AT1G79230 62.757 3.94e-151 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0461 09 3394897 3402230 Lele09g0461 09 3394897 3402230 ECH
Lele09g0461 09 3394897 3402230 Lele11g0450 11 4427516 4437529 hybridization
Lele09g0461 09 3394897 3402230 Lele12g0852 12 16462619 16468589 hybridization