Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0460 ATGACGAACGATCCAGAACTGATGAGCAGTTACTACAGTTCCTTCTTCCATGAAGAAACACCACCACCACCACCACCACTAGATTATTATTCAGATCATGATAGCTTCTTCCTTAATAATAATAATCCAAACAGTTCTCCGTTTGATTATTATTACCCTCCTCAATATCAAACACCACCACTGCTATTCTCTGACTATAACATTAACATGTTCCCCAATGATGATCAGAGCTTTCAATATCCCTTCCCTAATAAGCGCCAGAAGCTAAGCTTTGAGGATAATTATCAGTTACCATATTGTAATGATAATTATTTCTGTGATGGGCTTGAAGATAATTTTTATCCTTACTGTTGTTCTTCGTTAATGCCGGAGTTTAATGATATTGAGGGAGTTCCGTCGCTGCAGCTTCCGGTGGTGGCGGGGGCTGAGAGGACGGTGTCGGCGCAGAGCGTGGCGGCGAGAGAAAGGAGGAAGAAGATAGCGGAGAAGACGCAGGAGCTGGGGAAGATGGTGCCAGGTGGGAGTAAGATGAACACAGCTGAGATGCTTCTTGCAGCATCCAAGTATGTGAAATACTTGCAAGCCCAAGTTTCCATGCTACAGCTTATGAACACTCTCACGGAAGATAAAGAATCAACTGGGAGTGATAATGAAGATGAACAATTACAAGCAATGCTTGGCAGTGCTAGTGTTGAAGAGAAGCTCTACTTGCAGGAGAAGTGCTTGGCCCCACAACACTTGGTCACCACATTGACAAATCATTCTGATATCCAAACAAAACCTTCCATTCTCAAAGATCTTAAGGAGCTCATCATTGTCACAGACACTGATCACAAGGAGAAACAGCTCCAATAA 855 0.4316 MTNDPELMSSYYSSFFHEETPPPPPPLDYYSDHDSFFLNNNNPNSSPFDYYYPPQYQTPPLLFSDYNINMFPNDDQSFQYPFPNKRQKLSFEDNYQLPYCNDNYFCDGLEDNFYPYCCSSLMPEFNDIEGVPSLQLPVVAGAERTVSAQSVAARERRKKIAEKTQELGKMVPGGSKMNTAEMLLAASKYVKYLQAQVSMLQLMNTLTEDKESTGSDNEDEQLQAMLGSASVEEKLYLQEKCLAPQHLVTTLTNHSDIQTKPSILKDLKELIIVTDTDHKEKQLQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0460 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 204 IPR036638 GO:0046983
Lele09g0460 284 SMART finulus 150 199 IPR011598 GO:0046983
Lele09g0460 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Lele09g0460 284 Pfam Helix-loop-helix DNA-binding domain 152 194 IPR011598 GO:0046983
Lele09g0460 284 Gene3D - 143 214 IPR036638 GO:0046983
Lele09g0460 284 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 149 246 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0460 Lele-ChrLele09 3392343 3394428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0460 143 271 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 47.287 6.85e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele09g0460 HLH 5.2e-06 No_clan