Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0456 ATGCAGAAACAGCAACAGTACAATAACATGGAACCTAGAAATGAGGAAATCCATTCTGCACCACAGTCTACCGTGCAGGACCGTCTGGAAGGCATGCGTATCAATATGAGGCCTGCAGACCGTAATATGTCAGATAAAAAACCTGTACTTAATTACTCCATCCAGACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCATGGGTGATCCCAATTATGCAACAGGTTATATGGAATTGGAGGGTATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGCTCAGATATTTCCAGGCTTCCAAAAGTTGAAAAAGGTCCCAAGGAATTTGATAGAAGAAGCTCTTCTTTGCAACGGGAAAGACGCAATTATGGGTCAGTTCGATCAATCCCTAGAACTTCATCTAATCAAGAAAATAACCGAGTCCTTCATGGTCTTGCTCCTTCTGGAGCTTCTACCGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAAAATACTGCCACGCCCCAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACGCGTATTATTTCTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATAATGAAACTCATGCTATAAAGTATCAGCTCCCTGGGGAAGATATTGATGCCTTGGTTTCTGTATCTAGTGATGAGGATCTGCGAAATATGATGGAGGAATGCCATGATCTAGAAAACAGAGAAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCATGATTGATATGGATGAACCTAGTGTTGATGGTGATACGGAAATCCAGTATGTAGTGGCTGTTAATGGCATGGACTTGGGATCAAGCAACCATTCAGTCCTTCACGTTGCAAGCGCTTCTGCTGATAATTTACATGAACTAGATGGACAGAATATTGAGAGGGATTCCAGTACAACTCATATAGAATCAACTGGAGCCCCTAGTTCTTCCTTGACTGCCAATGCTAACTCATCATGGGGAATTCAGTCTTCACAACCAACGATTCCAACTGCCTCAAGTGCTTATGAAAGCAATCTGTTGTTTCATGGTAGCCATCATGGGGAAACCAGTCAATATCCAGTTCACTATGGTGTTGATTCTTCTAACTCAGGTTTTAGACAGATTCCAGTTTCTGTGCCTCCACATGTTACTAACAATCAAGGAATTATCAGTGAAGGGCATCAACCTGAAGTATTGCAGGTACAAAATCCAGAAATTCCAGCAATGCAGGTAAGGAAAAGGGGTGATAGTTCCATTAGGCATGAAAGTGACTCTGGGAAAGGCTTATCAGAAACACCATATCCTGTTCCTCTGCAACCGGTTGATGGAAATTTACCGGGTAATTTTTCCGAAGCATCAGTCACAAATGCTGTACCAGGGGTGCACCTTCCTAAAGTGCCTTCAAAAAGCAAGGTCAAGCATCATCATTATGAGGAGGCCTCTTCATTGGCTAATGCAGTGAATTCCACACAGATTCCGAAGTCTGGTGAAGATGACTTCTATTCCACCTCTACTAATGCTTTCAATCCTTCTTATATTGATGCTGGTTCCAATGTTATTGATTTGAGTTGCCTTGAGCCACTTCCCACCAGAGTTTATTATTCAGAGAGAATTCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATGCGCATGGTTCTCAGGTTCTCGTGTCTGATTTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAATCAGGTGATAATTTTCAGGTTGAAAATCTGTCAAATTGGAATGCGGGGTCAAGCACGACAGCAAAACCATTGAATACAAATGTCCATGCTATTGGCAATGGGCTTGCCCAGCTACAAAATCATAAACAGTTGCCAGATGCAAACAACACAGATAATAAAGTTGCTGCAAATGAGGATCAGATCCTTAGATATGAAAGTGAAACCAATTTATCCAAAGATAACCATAACAATCGCCCGGTTGATGAAACCAACAGCACTGAACATCCTGCATTTCACAAGGTTCCATCTGACCGTAATTTGGGCGATGCTTCTAACAAAGAAGCCAGTAATGAGGCTAAGGTTCAACTGCCCGTTTCTTTAACTGGGAAAGTGAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCACGCCTGCTCAAGGTGATATTATAATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAGGCAATAGTCTCTGAAGATTCCTCGCGTATTAGTCCATTGCCAACAGATGGAACAGGCTTGAGCTTAAATGTGGAAAATCATGAGCCAAAGCATTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTTGATAATGTGTCTCTAATTGATCAAGATCATCTAGGTTTTTCATCTACAATAAGAAAAGCACAAGAAGGAGATAGCAGATCTCAGCAAGTTGCACCCCTTCCAGTCGAAGGAGTTTCAGTAGGCCCTGATTTTGGTAAAGAAAATCAGAAAAATTTGCCCGTAACAACTAGAACAGAGGCCACTGTTCCACATCCAAACTATGATCAAACTCAAGTTATTGAGACTGAAAACAAGAATTTGGATCCAGTAAAGGGAAACACAAGAGTAGAAGACTCTGAATATGAGGATGGCAAGAATGAAGCAGGGAATATTAGTCATCTGCATGATCGTTCTGTGGATGATATTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTTGGGACTGTATACCATGGAAAATGGAGGGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGCTTCACGGGTAGATCTTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCACCCAAATGTGGTGGCATTTTATGGTGTAGTGCAAGACGGGCCCGGAGGAACATTAGCTACTGTCACAGAGTTCATGGTAGATGGTTCTCTACGGCATGTTTTGCTTCGTAAGGATAGGTATTTAGATCGCCGCAAGAGGCTGATAATTGCCATGGATGCAGCTTTCGGAATGGAGTATTTGCACGCAAAAAATATTGTACATTTTGATTTGAAATGTGACAATTTGCTTGTAAACTTAAAGGATCCTTTACGACCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGTGTGCGGGGAACTCTACCTTGGATGGCACCTGAACTTTTGAATGGCAGCAGCAATAAAGTCTCAGAGAAGGTTGATGTGTTCTCGTTTGGCATTGTGTTATGGGAGATTCTTACTGGTGAAGAACCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCAAGTTATTGTGATGCTGAGTGGCGGCAACTAATGGACCAGTGTTGGGCACCTAACCCTTCAGCCAGGCCATCATTCACCGAAATTGCTCGCCGCTTAAGGGTGATGTCAGCAGCTGCTATTCAGACCAAAGGGCAAGGCTACAAGGCATCTAAATGA 3657 0.4195 MQKQQQYNNMEPRNEEIHSAPQSTVQDRLEGMRINMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIMGDPNYATGYMELEGILGISHSGSESGSDISRLPKVEKGPKEFDRRSSSLQRERRNYGSVRSIPRTSSNQENNRVLHGLAPSGASTGSSMKMKVLCSFGGKILPRPSDGKLRYVGGETRIISIRKDISWQELMQKALSLYNETHAIKYQLPGEDIDALVSVSSDEDLRNMMEECHDLENREGSQKLRMFLFSMIDMDEPSVDGDTEIQYVVAVNGMDLGSSNHSVLHVASASADNLHELDGQNIERDSSTTHIESTGAPSSSLTANANSSWGIQSSQPTIPTASSAYESNLLFHGSHHGETSQYPVHYGVDSSNSGFRQIPVSVPPHVTNNQGIISEGHQPEVLQVQNPEIPAMQVRKRGDSSIRHESDSGKGLSETPYPVPLQPVDGNLPGNFSEASVTNAVPGVHLPKVPSKSKVKHHHYEEASSLANAVNSTQIPKSGEDDFYSTSTNAFNPSYIDAGSNVIDLSCLEPLPTRVYYSERIPREQADLLNRSTKSDDAHGSQVLVSDLLSDFNQQNSTTESGDNFQVENLSNWNAGSSTTAKPLNTNVHAIGNGLAQLQNHKQLPDANNTDNKVAANEDQILRYESETNLSKDNHNNRPVDETNSTEHPAFHKVPSDRNLGDASNKEASNEAKVQLPVSLTGKVSQDVSQGLPSDAVSTPAQGDIIIDIEDRFPRDFLYDMFSKAIVSEDSSRISPLPTDGTGLSLNVENHEPKHWSYFQKLANEGFDNVSLIDQDHLGFSSTIRKAQEGDSRSQQVAPLPVEGVSVGPDFGKENQKNLPVTTRTEATVPHPNYDQTQVIETENKNLDPVKGNTRVEDSEYEDGKNEAGNISHLHDRSVDDIDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDAEWRQLMDQCWAPNPSARPSFTEIARRLRVMSAAAIQTKGQGYKASK 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0456 1218 SUPERFAMILY Protein kinase-like (PK-like) 928 1198 IPR011009 -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 667 714 - -
Lele09g0456 1218 Pfam Protein tyrosine and serine/threonine kinase 937 1199 IPR001245 GO:0004672|GO:0006468
Lele09g0456 1218 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 190 272 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 889 912 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 132 155 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 433 476 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 327 358 - -
Lele09g0456 1218 Gene3D Phosphorylase Kinase; domain 1 929 1023 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 1 27 - -
Lele09g0456 1218 Gene3D - 189 272 - -
Lele09g0456 1218 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 929 1023 - -
Lele09g0456 1218 SUPERFAMILY CAD & PB1 domains 186 271 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 110 131 - -
Lele09g0456 1218 ProSitePatterns Protein kinases ATP-binding region signature. 942 967 IPR017441 GO:0005524
Lele09g0456 1218 Pfam PB1 domain 187 270 IPR000270 GO:0005515
Lele09g0456 1218 PRINTS Tyrosine kinase catalytic domain signature 1018 1031 IPR001245 GO:0004672|GO:0006468
Lele09g0456 1218 PRINTS Tyrosine kinase catalytic domain signature 1126 1148 IPR001245 GO:0004672|GO:0006468
Lele09g0456 1218 PRINTS Tyrosine kinase catalytic domain signature 1055 1073 IPR001245 GO:0004672|GO:0006468
Lele09g0456 1218 PRINTS Tyrosine kinase catalytic domain signature 1170 1192 IPR001245 GO:0004672|GO:0006468
Lele09g0456 1218 CDD STKc_MAP3K-like 942 1199 - -
Lele09g0456 1218 Gene3D Transferase(Phosphotransferase) domain 1 1024 1217 - -
Lele09g0456 1218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1061 1073 IPR008271 GO:0004672|GO:0006468
Lele09g0456 1218 MobiDBLite consensus disorder prediction 101 163 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 667 696 - -
Lele09g0456 1218 CDD PB1_UP2 174 270 - -
Lele09g0456 1218 MobiDBLite consensus disorder prediction 595 619 - -
Lele09g0456 1218 ProSiteProfiles Protein kinase domain profile. 936 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0456 1218 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1024 1216 - -
Lele09g0456 1218 SMART serkin_6 936 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0456 1218 SMART PB1_new 185 272 IPR000270 GO:0005515
Lele09g0456 1218 PANTHER SERINE-THREONINE PROTEIN KINASE 215 1200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0456 Lele-ChrLele09 3364024 3371739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0456 8 1128 MAP Kinase Kinase Kinase AT1G79570 45.477 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele09g0456 PK_Tyr_Ser-Thr 1.8e-62 CL0016