Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0450 ATGGAAATAGTTCCAAGTAACAGTGAAAATGCTGATCGGCCTCGTGTGAGAAGAGGACGCAAAAGAAAGAACGCCACTCTTAATCAAAGCAATAATTCATCATCTTCTTCCAACTCAGAAGCACCACCCCGTGCTATAGGCCTTGATGGATGTTTTTATGAGTGTGTGAAGTGCAATGAAGTAGGGTCGTTGATTTGCTGCGACACTTGTGCCTGCACGTATCATTTTGAATGCCTTGATCCTCCTCTTGAGGTACTGGACAACCTTTCAGATTCAACAGTAAATCCTAAGAGAAGACGACTACGTCCTCTGAAAAGAGCATGCAAAGTCTCTTCCGGATGTTGCTTGTGTTCAACCATCCCCAAGAAATTAATCCCCGATGAAAATGCCTTCTTTTCCTTTAAAACCAAATCAAATCCTCAGTCCAACTTATCAGCTCGTAATGATGATGATGGCGCTGGTGGTACTCACATCCCACGCAACACCAACAATGGGGATAAACGTTCCGTCCTTAGAGGAAGACAACACGGGAAGAGAACTGGCAAGGGGCCTACTGTGGCTTCTCAACAAAGACAACATGCAGGCCTCGCTGTGGTCTTACAAGGCGAAGTAGCAGCTGGAAGAGCTGCGGCTGAGGAAGCTTCGCGTAATAAAGCAAGAGAAACTCCATGGACTGAGGATGAGGTTGATGCTTTGTGGGTTGGTGTTCGGAGACATGGTCCTGATAATTGGGACACAATTCTGAATGATAAAAAGCTCAGAGTTCTTCAACTTTGTAAGAAAACCTCTCATGATCTCTCCATGAGATGGCAAAAAGAGCTTGAAATTATGTACTCCATTGTCAAAACATCAGGCTTCTCCTTGCCTCTTCCTCCTCCTCCTGCTGCTGATCATCCTGTAGTAGATCACACACCAGAACCAGCAATATTATCAAATGAAGAGGCCACTGTGCAACAACAATTGCCTCAGCTACAAATCCCAGTTCTTTCTTCTGCAGAATCTGCTCCTTTGGTTCCTAATCATCACCCAGGATCATCATCTTCATCTTCATCTCCCCTTAGACCTCCAGTTCCTTCGATTCCACCACCAGCAGCAGGAGAAGCAGAAAGAGGACCTATAAATCAATCCACAAGCCAGCTGCAGCATGTTTCGCCTACTTTTGCTGTTGCTCCTCCTCCGCAATGGAGGCCAAATCTCAACCTCAATCCCATGGCCAATCAACTTATGTTTCAGGCTTTTCAGCGTACTCAAATGATGAACCACATGGGCATGCAGGCTCCACGAGGAGGAGTAGCGATGGCTGCCCAGAGACCTCCTGCAAATACTACTGTTTCCCCCACCAACCTCTTCATCGGCGGTTTTTTGCCTGTTCACCATGCATATGGTGGTGCTCGACCCAACAACCCTGCCGTCCTAAACCAGTATTTAGGTCGAGATCGATGA 1443 0.4657 MEIVPSNSENADRPRVRRGRKRKNATLNQSNNSSSSSNSEAPPRAIGLDGCFYECVKCNEVGSLICCDTCACTYHFECLDPPLEVLDNLSDSTVNPKRRRLRPLKRACKVSSGCCLCSTIPKKLIPDENAFFSFKTKSNPQSNLSARNDDDGAGGTHIPRNTNNGDKRSVLRGRQHGKRTGKGPTVASQQRQHAGLAVVLQGEVAAGRAAAEEASRNKARETPWTEDEVDALWVGVRRHGPDNWDTILNDKKLRVLQLCKKTSHDLSMRWQKELEIMYSIVKTSGFSLPLPPPPAADHPVVDHTPEPAILSNEEATVQQQLPQLQIPVLSSAESAPLVPNHHPGSSSSSSSPLRPPVPSIPPPAAGEAERGPINQSTSQLQHVSPTFAVAPPPQWRPNLNLNPMANQLMFQAFQRTQMMNHMGMQAPRGGVAMAAQRPPANTTVSPTNLFIGGFLPVHHAYGGARPNNPAVLNQYLGRDR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0450 480 SUPERFAMILY Homeodomain-like 221 275 IPR009057 -
Lele09g0450 480 CDD SANT_TRF 223 270 - -
Lele09g0450 480 MobiDBLite consensus disorder prediction 25 42 - -
Lele09g0450 480 SUPERFAMILY FYVE/PHD zinc finger 51 86 IPR011011 -
Lele09g0450 480 MobiDBLite consensus disorder prediction 334 381 - -
Lele09g0450 480 Gene3D - 221 273 - -
Lele09g0450 480 PANTHER PHD FINGER PROTEIN 18 84 - -
Lele09g0450 480 MobiDBLite consensus disorder prediction 139 193 - -
Lele09g0450 480 ProSiteProfiles Myb-like domain profile. 216 274 IPR001005 -
Lele09g0450 480 Gene3D - 2 91 - -
Lele09g0450 480 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0450 Lele-ChrLele09 3334100 3337930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0450 224 271 Single Myb Histone (SMH) Gene Family AT1G17520 43.750 4.26e-06 46.6