Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0446 ATGATCATCAACTTTCAACCTTCTTCTTCTTCTTCCTCCTTCTTCAAATCTCTCTGCGTTCACAAGTTCCTCATCATCTTCGTCGTGGTCGTGGTCGTGGTCTTCCCCAGTACTGTGTCTTCTTCTTCTTCTGGGGATGGCTGTTCCTGTGACCACTCAAAAGCTAAGAACAGTGACGATGCAAGTGAAGCTCTGAGATACAAACTCGGCTCCATAGCTTCTGTTCTGATCGCCGGTGGTCTCGGCGTGAGCCTTCCATTGCTAAGCAAGAAGATCCCAGCTCTGAGACCTGAAAATAACATGTTCTTCATGGTGAAAGCTTTCGCCGCTGGAGTGATCCTAGCCACTGGGTTCGTTCACATACTTCCCGAAGCATTCGAGAGCTTGAACTCTCCATGTTTAACAGAGAAACCTTGGCACAAGTTTCCCTTCACCGGCTTCGTCGCCATGGTTTCCTCCATAGGAACATTAATGGTGGATTCTCTTGCAACTGGGTATTATAAAAGAATACATTTCAGCTCAAAACAAGTTTCTTCTACAGATGAAGAGAAAGGAGACGATGACGAACATGCGGATCATATTCATGTTCACACTCATGCGACGCACGGTCATGCTCACGGATCAGCACAAGAGGACTCAGAGTTAATCAGGCACAGAATCATATCACAAGTGTTGGAGATGGGAATAGTGGTGCATTCAGTGATCATTGGAATCTCTTTGGGTGCTGCTGGCAGCATTGATGCTATAAAGACTCTCTTAGTGGCCCTCTCTTTTCATCAGTTCTTTGAAGGCATGGGACTTGGTGGTTGTATTTCTCAGGCCAAGTTCAAGTCAAGAGCAACAGCAATAATGGCAACATTTTTCTCACTGACAACACCAATAGGGATAGCAATAGGGATGGGAATTTCAAGTGTGTATGAAGAGAACAGCCAAACTTCAATGATAGTTGAAGGCATTTTCAATTCTGCTTCAGCTGGCATCTTAATCTACATGGCTCTTGTTGATCTTCTTGCTGCTGATTTCATGAACCCTAAGCTTCACAGCAACGTGAAACTCCATCTTGGAGCTAACATCTCTCTCCTTCTTGGCTCTGCTTCCATGTCTCTCTTAGCTAAATGGGCTTGA 1125 0.4507 MIINFQPSSSSSSFFKSLCVHKFLIIFVVVVVVVFPSTVSSSSSGDGCSCDHSKAKNSDDASEALRYKLGSIASVLIAGGLGVSLPLLSKKIPALRPENNMFFMVKAFAAGVILATGFVHILPEAFESLNSPCLTEKPWHKFPFTGFVAMVSSIGTLMVDSLATGYYKRIHFSSKQVSSTDEEKGDDDEHADHIHVHTHATHGHAHGSAQEDSELIRHRIISQVLEMGIVVHSVIIGISLGAAGSIDAIKTLLVALSFHQFFEGMGLGGCISQAKFKSRATAIMATFFSLTTPIGIAIGMGISSVYEENSQTSMIVEGIFNSASAGILIYMALVDLLAADFMNPKLHSNVKLHLGANISLLLGSASMSLLAKWA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0446 374 TIGRFAM zip: ZIP zinc/iron transport family 50 374 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele09g0446 374 Pfam ZIP Zinc transporter 67 371 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele09g0446 374 PANTHER ZINC/IRON TRANSPORTER 64 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0446 Lele-ChrLele09 3306395 3309145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0446 23 374 Inorganic Solute Cotransporters AT3G12750 61.582 3.07e-153 434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0446 09 3306395 3309145 Lele09g0446 09 3306395 3309145 ECH
Lele09g0446 09 3306395 3309145 Lele11g0432 11 4300035 4303037 hybridization
Lele09g0446 09 3306395 3309145 Lele12g0869 12 16562598 16565555 hybridization