Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0445 ATGGAATATTCTGTGGTGAAAAATCAAAGTTTTAATTTCAAGTCTCTTATATCAGCACAGTTCATTGCAGTAACTGAAAGAAGCAGAGATGCAGAGAGATCGATGAGAGTAACATCAAAAGGTGAAAAGCATGGAAGAATTCTGACACACAAGCACACGAAGAAGTTGAGAATAGTGGCTTTGGAGCATTTTGATTTTTCTTCTTTAGAATTTTCAAATGCTGCCCAGAGTGTTGCCTCATCATCTCCTTTGCCACCATATGAATCTATAACTCCTGTTCCTTTACCACAAAATGGCTCCCCGTTTTGTTATCCTCCTCCATCTCCGACGACGGGCCTTCAATTACCACCACCAGGCCCAACTGGATCTTTTCCCACACCTACCCCACAAAGTATCCCAAACTCGCCTGACATGGGTTCCCCCTTACAAAATACTCCAATTATTATCCCAGGCCCACCGGGTAACATTCCGGGCTCACCAAGTACTACTATCCCATCCCCAAGTGGAGGCACTGGGCAGGCCTCACCTGAACCGACACAAAATCCTCCAATAATTCTCCCAAGCCCACCAAGTACTATCCCATCGACACAAAATCCACCTGGGTCTACAACGAATCCGCCGAGTACAATTTCGCCACCTAGTGAAGGTTCCGTTCCTAGCTCCCCGGAACCAATTCAAAATCCTCCTATTATTCTTCCAGGCCCACCCGGGTCAACCACAAACCCACCGAGTACAAACCCATCTCCTGGCGGTGGTGGAGGAGGAGGAGGTGGTGGCAATGTTCCTAGCCCAACAGTGTTTGAGCCTCCTGTAGTGTATCCACCACCTTCAGTGCCTCCTCCTCCAAGCCGCATGGCTCCAAGTGGAGCCTTATGGTGTGTGGCTAAGCCATCAGTGCCAGACCCAATAATGCAAGAAGCCATGGACTATGCTTGTGGGTTAGGAGCAGATTGTGATCCCATTCAGCCCAATAGGCCTTGCTTTGAGCCTGATACTGTTATTGCACACACTTCATTTGCTTTCAATAGTTTCTGGCAAAACTCCAAGGCCACTGGTGGGACCTGTGACTTTGGAGGGACTGGCATGCTTGTTTCAGAGGACCCAAGCTACAATGGATGCCACTTTGTCTACAGTTAG 1137 0.482 MEYSVVKNQSFNFKSLISAQFIAVTERSRDAERSMRVTSKGEKHGRILTHKHTKKLRIVALEHFDFSSLEFSNAAQSVASSSPLPPYESITPVPLPQNGSPFCYPPPSPTTGLQLPPPGPTGSFPTPTPQSIPNSPDMGSPLQNTPIIIPGPPGNIPGSPSTTIPSPSGGTGQASPEPTQNPPIILPSPPSTIPSTQNPPGSTTNPPSTISPPSEGSVPSSPEPIQNPPIILPGPPGSTTNPPSTNPSPGGGGGGGGGGNVPSPTVFEPPVVYPPPSVPPPPSRMAPSGALWCVAKPSVPDPIMQEAMDYACGLGADCDPIQPNRPCFEPDTVIAHTSFAFNSFWQNSKATGGTCDFGGTGMLVSEDPSYNGCHFVYS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0445 378 Pfam X8 domain 291 362 IPR012946 -
Lele09g0445 378 MobiDBLite consensus disorder prediction 217 243 - -
Lele09g0445 378 MobiDBLite consensus disorder prediction 180 196 - -
Lele09g0445 378 PANTHER BETA-1,3 GLUCANASE 287 375 IPR044788 -
Lele09g0445 378 MobiDBLite consensus disorder prediction 197 216 - -
Lele09g0445 378 MobiDBLite consensus disorder prediction 146 160 - -
Lele09g0445 378 Gene3D - 285 377 - -
Lele09g0445 378 SMART X8_cls 291 375 IPR012946 -
Lele09g0445 378 MobiDBLite consensus disorder prediction 98 134 - -
Lele09g0445 378 MobiDBLite consensus disorder prediction 98 278 - -
Lele09g0445 378 MobiDBLite consensus disorder prediction 161 179 - -
Lele09g0445 378 FunFam Glucan endo-1,3-beta-glucosidase 4 286 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0445 Lele-ChrLele09 3302801 3305764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0445 292 376 Glycoside Hydrolase AT5G56590 46.512 3.45e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0445 09 3302801 3305764 Lele09g0445 09 3302801 3305764 ECH
Lele09g0445 09 3302801 3305764 Lele11g0431 11 4295585 4299203 hybridization
Lele09g0445 09 3302801 3305764 Lele12g0870 12 16568270 16570359 hybridization