Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0444 ATGTTACTGGGTACCACCTTGTCTGTCTTGCCTTCTCACTTTCCTCCTTCGGTTTCTCCAGATCTCACCGCAACGGTAGGACTCATCGCTCAGGAGGAGGATGATATATTTTTGGAGCCAACCACATGTGCCATTGCATTTCGTTTACTACGTTTACATGAATACGATGTTTCTTCAGATGCACTGAGTCGATTTTCAAAGGAGAAATTCTGCAATACCCTTCAAGGACATTTAAAGGATGTGAATGCTGTTATGGAGTTACACAAGGCTTCACAAATACCTATACATTCAAATGATCCAGTTTTGGAAGAACTAAACTCGTGGACAAGAGACTTCCTTAAAGAATATTTGTCTTGTTCCTCACAACAGGATCACAAACCACTTCATAACATTGATCATGAGGTTCGGTTTTCTTTGCGATTTCCTCATCACGCTTATTTGGATCGCATGTTCAACCGAAAAATAATGGAGAATTATAAGGCTGACCAAAAGAGAATTCTGAAAACATCATACAGTTCCGTGAACCTTGGAAACAGAGAATTCATTGAGTTAGCAGTGGAAGACTTCAATAGCTGCCAACTTGTAATTCGCGAAGAATTCGAAGAATACAACAGGTGGTTCATTGAGAGTGGAATGGACAAGCTAGAGTTTCCGAGACCAAAAGTGGCCTATTCCTATTTGACTGCAGGAGGAACACACGTGGCACCTGAGCTTCGTGAGGCTCGAATGTCATGGGCAAAGAATGCCTTGCTCATATGTGTTTCTGACGACATGTACGATGTTTGGGGTTGTGAAGAAGACCACATAAAGTTAGTCCAACTAATGGAGAAGTGGGACGTGGATATCGAGAAGGAAAATTGTTCAGAGCCAGTTAAGATATTATTCTTAGCCCTAAAAGGGACCATCTGTGAGATAGCAGACCAAGCCGTTAAAATTCAAGGACGAAGCGTGTTGAACCACCTCATTCAACTTTGGGTGGAGTGTCTGCAATGCTTTCTACAGGAAGCCGAATGGCGGAGAAACAATTATGTGCCAACTTATGAAGAATATGTGCCTGTGTCACTGACATCATTTGCCGTGGGGCCAATTGTCCTGTCAGGTCTCTATCTTGTTGGACCTAAGCTTCCGCAGGAAAGTATTGAAAGTGATGAATACAATCGTCTCTTTTACCTTGTTAGCATTTATGGACGATTACTCAACGATATCAACGGCTACAAGAGAGAAATAGCAGAAGGGAAACTGAACGTAGTAGCTTTGAGAATGAGGAATGGATCAGGAAGTAAAGAAGAGGTGGTGAAGAAGATACAGGAAGAGATAGAAGAAACCAGAAGAGAGCTGTTGAGAATGGTTTTGGAGAAAGAAGGAAGCATAATACCAAGGGAAGTGAAGGATATAATATGGAAAATGGCGAGATCGTTGTATGTGATATACAAGAAAGAAGATGTGATCCATGCACGTGACTTGTCGGACGAGGTCATTAGTATCAAAGATGTAGTTGTCACTTGTCAGCGATCCCATAGTTCTAAGCATATGAAATGTAATTAG 1545 0.4168 MLLGTTLSVLPSHFPPSVSPDLTATVGLIAQEEDDIFLEPTTCAIAFRLLRLHEYDVSSDALSRFSKEKFCNTLQGHLKDVNAVMELHKASQIPIHSNDPVLEELNSWTRDFLKEYLSCSSQQDHKPLHNIDHEVRFSLRFPHHAYLDRMFNRKIMENYKADQKRILKTSYSSVNLGNREFIELAVEDFNSCQLVIREEFEEYNRWFIESGMDKLEFPRPKVAYSYLTAGGTHVAPELREARMSWAKNALLICVSDDMYDVWGCEEDHIKLVQLMEKWDVDIEKENCSEPVKILFLALKGTICEIADQAVKIQGRSVLNHLIQLWVECLQCFLQEAEWRRNNYVPTYEEYVPVSLTSFAVGPIVLSGLYLVGPKLPQESIESDEYNRLFYLVSIYGRLLNDINGYKREIAEGKLNVVALRMRNGSGSKEEVVKKIQEEIEETRRELLRMVLEKEGSIIPREVKDIIWKMARSLYVIYKKEDVIHARDLSDEVISIKDVVVTCQRSHSSKHMKCN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0444 514 SUPERFAMILY Terpenoid synthases 180 480 IPR008949 -
Lele09g0444 514 Coils Coil 425 452 - -
Lele09g0444 514 FunFam Ent-kaur-16-ene synthase, chloroplastic 192 501 - -
Lele09g0444 514 Gene3D - 13 191 IPR036965 GO:0010333|GO:0016829
Lele09g0444 514 Pfam Terpene synthase, N-terminal domain 33 138 IPR001906 GO:0010333|GO:0016829
Lele09g0444 514 Gene3D Farnesyl Diphosphate Synthase 192 503 IPR008949 -
Lele09g0444 514 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 33 483 - -
Lele09g0444 514 Pfam Terpene synthase family, metal binding domain 183 445 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lele09g0444 514 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 12 162 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0444 Lele-ChrLele09 3291932 3296210 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0444 09 3291932 3296210 Lele09g0444 09 3291932 3296210 ECH
Lele09g0444 09 3291932 3296210 Lele11g0424 11 4169311 4173428 hybridization