Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0427 ATGTTCCCTCCAAAGAAGCCCTCCTCTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGAGACTCTGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGACGCCGTCACTCAACTCGGCGGCCCCGATAAGGCCACGCCTAAAACCATCATGAGGGTTATGGGTGTCAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATAGTATGAGAGCTTCGGCTTTAGAGCTTCAACGGAACACTGCTTCCCCATCGGCCATGATTGGTCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGAAGACTGCATGAACAGCTTGAGGTCCAGAAACATCTTCAGCTAAGAATTGAAGCTCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGTTGCCACTAATAACTTAAAGGGAAATATCAATATCGGAGCAGCTCAAGCCATCCCTGAAATAGGAGGAGGAGTCATGAAAGATTTTACTTCTCCTCTGAGTTTTCCTTTTCAAGAACTCAACATCTATGGTGGTGGTAGTGGCGGCAGCGACCAACTTGATCATCATCTTCACCATATGGAGAGGCCACAGCTCGAAGGGTTGATGATACCGAGTAACAGCAATAACAATAACCATAATGAAAATTTGTGTCTGGGCAAGAAGAGGCCAAGTCCTTATAATAGTACTACTACCGGGAAGAGTCCTTTGATTTGGAACGATGATCTTCGGCTTCATCAAGATTTAGGGACGGCTTCTTCATGCCTTGGAGGACCTCAAGATGATCCTTTCAAAGGCCTTGACCAGGCGCAACTTCCCATTGCCCCGCCGTCATTGGATCATAGATCAGGTGAAATGGACCCCATGTCAGAGATTTATGACACGAAGCCAGTGGTACAAGGAGAAGCTGTGTGTGACAAGTTTTCAGACGCCTCGGTGAAGCTTGAAAGGCCGTCGCCAAGAAGGACGCCGACTACCGCTCCTCTTCATGGAGAAAGGATGAGCCCCATGATTAATAGTGGTACTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1176 0.4813 MFPPKKPSSMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALELQRNTASPSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMVATNNLKGNINIGAAQAIPEIGGGVMKDFTSPLSFPFQELNIYGGGSGGSDQLDHHLHHMERPQLEGLMIPSNSNNNNHNENLCLGKKRPSPYNSTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDQAQLPIAPPSLDHRSGEMDPMSEIYDTKPVVQGEAVCDKFSDASVKLERPSPRRTPTTAPLHGERMSPMINSGTMAQGRSSPFG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0427 391 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Lele09g0427 391 MobiDBLite consensus disorder prediction 1 24 - -
Lele09g0427 391 FunFam Myb family transcription factor 31 89 - -
Lele09g0427 391 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Lele09g0427 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Lele09g0427 391 MobiDBLite consensus disorder prediction 349 391 - -
Lele09g0427 391 MobiDBLite consensus disorder prediction 377 391 - -
Lele09g0427 391 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Lele09g0427 391 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Lele09g0427 391 Gene3D - 31 89 - -
Lele09g0427 391 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 178 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0427 Lele-ChrLele09 3018188 3020707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0427 1 391 G2-like Transcription Factor Family AT1G79430 55.224 1.86e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele09g0427 Myb_DNA-binding 2.2e-06 CL0123