Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0422 ATGTCAATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGACTGTGGTCTCCTGAAGAAGATGACAAGCTAGTCAAATTCATTACCACTAATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGTTGTGGGTTCTATACCTCAAAATGGGCTCAGATAGCGAAGCATCTACCGGGAAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGCATTAAGAAGAAACTCATTTCTCAGGGCTTCGACCCTCAAACTCACAATCTTCTCTCTTCTCATCGACCGCCTTCTCTTTCTCTTTCTTCCAAATCTGAATCCACTTTCAGACTCGTCCATGAACCTCATCATCGTAATATGAATCTTCAACCACCTTGTACCTCCGTACCCGTCTTCTCCGTCGAATACCAGCAGCAACCTAATTATAATGTCTGTAACAGTAGTAGTAATAATAATAATAATAGTAATGTCCATGAACCTCATAATTTTCCCTTTGAATCATCCATTATTATTAATGACGGCAATAATAATAATAATAATAATCCTGCGCCCAAGAACAATAATGATTGCTTATCCTCACTTGTCGGGTTTTCTGAGAATATTGACAACAGATCATCATCATCTTCAGTGTGGGTTTCTCGGGATGATCATATTGCTGAAACTCATCAGATCTTTAGATCATCAGCTCAGACATTAATGGAGGAAGGAGAAATTACTACTGAAGCACAGTTAGAACAAGACAAGGACAAGGACAAGGACAAGAGGAGTACTACTACTGATAATAATATTGAGCAACTCAGAGAAGAAGACAATATTAATTATAATATTAATAGCAATAACAATAACTTTGATTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTTCTCTCCTCCATGGATGATGATGACCTTGCGTGGAACTTTTAG 954 0.3868 MSMGHRCCSKQKIKRGLWSPEEDDKLVKFITTNGHKSWSSVPKLAGCGFYTSKWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRPPSLSLSSKSESTFRLVHEPHHRNMNLQPPCTSVPVFSVEYQQQPNYNVCNSSSNNNNNSNVHEPHNFPFESSIIINDGNNNNNNNPAPKNNNDCLSSLVGFSENIDNRSSSSSVWVSRDDHIAETHQIFRSSAQTLMEEGEITTEAQLEQDKDKDKDKRSTTTDNNIEQLREEDNINYNINSNNNNFDFGLLEGVLNSEYMSYDVLSSMDDDDLAWNF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0422 317 SUPERFAMILY Homeodomain-like 12 73 IPR009057 -
Lele09g0422 317 MobiDBLite consensus disorder prediction 243 264 - -
Lele09g0422 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 81 IPR017930 -
Lele09g0422 317 PANTHER MYB DOMAIN PROTEIN 55 3 46 - -
Lele09g0422 317 MobiDBLite consensus disorder prediction 244 264 - -
Lele09g0422 317 CDD SANT 18 74 IPR001005 -
Lele09g0422 317 Pfam Myb-like DNA-binding domain 15 75 IPR001005 -
Lele09g0422 317 Gene3D - 12 82 - -
Lele09g0422 317 ProSiteProfiles Myb-like domain profile. 10 77 IPR001005 -
Lele09g0422 317 SMART sant 14 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0422 Lele-ChrLele09 2966125 2968192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0422 3 98 MYB Transcription Factor Family AT3G12720 58.333 3.86e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele09g0422 Myb_DNA-binding 1e-11 CL0123