Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0421 ATGGCACCGATGAGTCTCCCACCTGGGTTTCGGTTCCACCCAACAGATGAAGAACTCGTTGCTTACTACTTGGAAAGAAAAATCACAGGCCGTTCTATAGAGCTTGAAATTATCCCTGAAGTTGATCTTTACAAATGCGAACCATGGGATTTGCCAGATAAGTCGTTCTTGCCAAGTAAGGATTTGGAGTGGTACTTCTACAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAACAGAGCAACAAGAGCTGGATACTGGAAAGCCACAGGCAAAGATAGAGCAGTTCATTCTCTGAAACGCCAAGTAGGGATGAAGAAGACGTTGGTTTATTACAGAGGAAGGGCCCCACATGGCATTAGAACCAACTGGGTCATGCATGAGTATCGCCTCACTGATACACTCCCTCCTCCCTCTTCTTCCTCCTGCTCCTTGAAGGATTCTTATTCATTGTGTCGTGTCTTCAAGAAGACGATCCAAATCCCAAAACCAAAAGAAGAACAGGAGGAAGAGGAAACAGAAATGACTGATAAGAATAATAATAAGGGATCAAAGTCTGAGATGTGGGTCGCATCAGAAGAACAAGGATTAAGGGAGGATTCAAGTGGCTTCCAGGTTTCTAAAGAAATGGAAATTGCAGATGAGAAAATTAATATCGTCAATAATAATAATAATAATAATAATAATCATGACGGTGGTGACAATTCTAATAGCAAATTTCCAGCTTGTGATAATGCTTCATCTTCGGATCTCACTCAAGGGACCCCCACTGATAATGATTTTCAAGCCCAAATTGCTTCTGATGAAGCAAATAGTGCAGCTAATCCGTTTTCCCTTGGAATTGACTATTCATCAAATCTATTTCAGGAAATGGAGCTACAAAGGTATGCTGGCATCCAGTATCAACTTCCATATCCACCATTGGAGCTTGAAGATTTTCCTCAAACAAGTTTTGTAGAGACGAAGCCATTAATGAAGCCAGCAGCAGAACAAATGATGATGATGAATGAATGCAACAATATGGTGTATGATCACAAGTACAAGAGCTGTACTACAATGAGTGGGACCCTAGAAGAGATCATCTCCTTGTGTTCGTCTCATCATCATCAAGACAATAACTCTTTGCCTCTCTCTATTCTAGATTGA 1152 0.4097 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPDKSFLPSKDLEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSLKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTDTLPPPSSSSCSLKDSYSLCRVFKKTIQIPKPKEEQEEEETEMTDKNNNKGSKSEMWVASEEQGLREDSSGFQVSKEMEIADEKINIVNNNNNNNNNHDGGDNSNSKFPACDNASSSDLTQGTPTDNDFQAQIASDEANSAANPFSLGIDYSSNLFQEMELQRYAGIQYQLPYPPLELEDFPQTSFVETKPLMKPAAEQMMMMNECNNMVYDHKYKSCTTMSGTLEEIISLCSSHHHQDNNSLPLSILD 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0421 383 MobiDBLite consensus disorder prediction 222 261 - -
Lele09g0421 383 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Lele09g0421 383 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lele09g0421 383 Gene3D NAC domain 15 163 IPR036093 GO:0003677|GO:0006355
Lele09g0421 383 FunFam Nac domain-containing protein 86 15 162 - -
Lele09g0421 383 MobiDBLite consensus disorder prediction 164 183 - -
Lele09g0421 383 MobiDBLite consensus disorder prediction 164 206 - -
Lele09g0421 383 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 236 - -
Lele09g0421 383 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0421 Lele-ChrLele09 2959778 2963410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0421 1 364 NAC Transcription Factor Family AT1G54330 51.507 1.10e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0421 NAM 3.2e-39 No_clan