Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0401 ATGCAAGGAAGTGGACAAATAGCAGTGCCTCCAGGGTTCAGGTTCCACCCTACAGATGAGGAGCTTCTTTACTATTATCTCAGGAAGAAAGTCTCTTTTGAAGCCATTGACCTCGATGTCATCCGTGAAGTTGATCTCAACAAACTTGAGCCTTGGGATCTCAAAGAGAAATGTAGGATTGGATCAGGACCTCAGAATGATTGGTACTTCTTCAGCCACAAGGATAAGAAGTACCCGACCGGAACGCGAACGAACCGGGCAACGACGGCCGGATTCTGGAAAGCAACGGGGAGAGACAAGGCCATATACCTGAGCAACTCCAAGAGGATAGGGATGAGGAAAACCCTAGTCTTCTACACTGGCCGTGCTCCTCAGGGCCAAAAGACCGACTGGATCATGCATGAGTACCGCCTCGACCAAGACGATGCTGATCAGCTTCAGGAAGATGGGTGGGTGGTGTGCAGGGTTTTCAAGAAGAAGAACTTTAACAGAGGGTTTCAACCAGAAATGGAAGAAGAGGAGCAGATAATGAGTCACATGGCGTCAACAAGTACTGCTTCTAATAATAATTGCATGAAGGTGCTTGAACCATTAAAACACCGCCTCCACCTTCATCATCATCATCATCAAGGACTTGTTCAACCTTATTATGATGATGGCCACCATAATAATAATCATAGTAACTATGATAGTAATAATAATTATTATAGTAGCTGTTTTAATGCCTCAATGCACCTACCACAGTTGTTCAGCCCAGAATCTGCAGTACCACCCCTTCCTTCTGCAACCTCCTCTTCGCCATCGTCGACGTCCACGATGAACCCCATGGACGTCCTTCACTGTTCTCACAACCTACTTAGGCTCGCTTCATCAACTTCTTCTCCTCCTCCTGGAGGATTCATTAGTAATCTCATGCAGCAACAAGGGGATCAGAGACTCAATAATGGAGACTGGTCGTTCTTGGACAAGCTGTTAGCTTCACAACAACAACAACAACCTGATGTGGTTCCTGCTATGGGGGCTTCTCCTCCTCCTGCTTCTTCTTCCCACAAGTTCCCTTTTCGTTACCTCGCTTGTGATCAGAGTGACATCATGAAGTAA 1101 0.4641 MQGSGQIAVPPGFRFHPTDEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYLSNSKRIGMRKTLVFYTGRAPQGQKTDWIMHEYRLDQDDADQLQEDGWVVCRVFKKKNFNRGFQPEMEEEEQIMSHMASTSTASNNNCMKVLEPLKHRLHLHHHHHQGLVQPYYDDGHHNNNHSNYDSNNNYYSSCFNASMHLPQLFSPESAVPPLPSATSSSPSSTSTMNPMDVLHCSHNLLRLASSTSSPPPGGFISNLMQQQGDQRLNNGDWSFLDKLLASQQQQQPDVVPAMGASPPPASSSHKFPFRYLACDQSDIMK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0401 366 FunFam NAC domain-containing protein 18 163 - -
Lele09g0401 366 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Lele09g0401 366 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Lele09g0401 366 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lele09g0401 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 230 - -
Lele09g0401 366 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele09g0401 366 MobiDBLite consensus disorder prediction 329 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0401 Lele-ChrLele09 2805908 2807216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0401 1 327 NAC Transcription Factor Family AT1G79580 56.380 6.01e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele09g0401 NAM 1.3e-37 No_clan