Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0399 ATGTTGAGCTCACCTTCACTTTTGGGTCTGGGATTGTTCACTGATGCTTTCTTCTTCTTCTTGCTTCCTTGTTTTCAGGGAACTCCAGTGAACATAATCGTTGGATCACATGTCTGGGTTGAGGATCCTGAGATTGCTTGGACTGATGGTGAGGTCACAGCAATCAATGGCAGCGACGCTACCATCCTTACTACACATGGGAAAACCATTGTTGCAAGCGTTTCTAGTATATATCCTAAAGATACAGAGGCACCACCAGCTGGAGTTGATGATATGACCAAGTTAGCATACCTTCATGAGCCAGGAGTACTGCATAATCTTTCCATTCGTTTCTCTCTCAATGAGATATACGTTTTAGAGGATGTCAAAAAGTACAAGTTGGGGGATCCTAGGAAATTTCACTACCTTAATCAATCAAACTACTATGAAGTAGCAAATGTGGATGATGCAAAGGAATATCTGGAGACCAGAAATGCAATGGATATCGTAGGAATCAGCCAGGATGAGCAGGATGCAATTTTCCGCGTGGTATCCGCAATCCTCCATCTCGGTAACATCGACTTCATCAAAGGAAACGAAGTTGATTCTTCCAAAGTAAAGGATGAAAAATCAATCTTCCACCTTCACACTGTTGCAGAACTGCTCATGTGTGATGAGAAAGCATTAGAAGACTCGCTTTGCAAGCGTGTCATTGTTACTCCTGATGGTAACATCACGAAGCCACTAGATCCTGACTCGGCTGCTTTAAGTCGCGATGCTTTGGCGAAGACCGTTTACTCGAGGCTGTTTGATTGGATTGTGGACAAGATAAACAATAATCAAGATGTTCTTGATCTTATCGAAAAGAAACCTGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTCCCCAAGTCAACCCATGAGACATTTGCCCAAAAATTGTATCAGACGTATAAAGCACACAAGCGTTTTAGCAAGCCCAAACTTGCAAGAACAGATTTCACAATTAACCATTATGCTGGAGATGGAGTACTCGAGGCAATTCGGATTAGTTGTGCTGGATATCCAACAAAACGAACATATGATGAGTTCCTTGATCGTTTTGGAATGCTAGCCCCTGATGTCCTTGATGGATCTGACGAGAAAACAGCATGTGTTGCAATATGTGATAAGATGGGATTAAAAGGCTATCAAATGGGAAAAACGAAGGTATTTCTGAGAGCTGGGCAGATGGCTGAATTAGATGCAAGAAGAGCTGAAGTCTTAGCCAGAGCGGCTAGATGCATACAGAGACAAATCCGAACACATTTGACCAGAAAAGAGTTCCTCACCCTCAGAAAGGGCACAATTCATATCCAAAAATTATGGAGAGGTTTAAGAGCAATGGCAGCACGAAATGAATTCAGGTACAGACGAAGAACAAAGGCTGCAATCGAAGTTCAGACACAATGGAGAAGTTTCGACGCTTTTTCTGCTTACAAAAAGCTCAAGAAGGCAACTATTTCTCTTCAATGTCTCTGGAGAGCCAAAGTAGCTAGGAAGGAGCTCAGGAAGCTAAGGATGGCTGCAAGGGAAACGGGGGCACTTAAGGAGGCGAAGGACAAGTTGGAGAAACGGGTTGAAGAGCTTACATGGCGACTTGATATCGAAAAGCACTTGAGGATTGATCTTGAGGAAGCTAAAGGGCAAGAAATTGCAAAGTTACAGAATGCATTACAAGAAATGCAAAGTCAGCTTGATGAAGCTCATGTTGCAATTATACACGAGAAGGAAGCAGCTAAACTAGCTATTGAATCTGCTCCACCAGTCATCAAAGAGGTACCTGTCGTCGACAATACCAAACTCGAGCTACTGACAAGTAAAAATGTGGAGCTAGAGAGTGAAGTACAAGAGCTGAAGAAGAACATTGAAGAGTTTGAGGTACGGTGTTCAGACATGGAAAAAGAGTCTCAAGAAAGGATGAAAAAGGCTGAAGAAGCACATTTGAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAGTCGAATTTGTCAAACCTTGAGTCTGAGAATCAAGTTCTACGCCAGCAGGCTTTGGTCGAATCAAAAAATGAGGAACTCTCCGAGGAGCTTAAAACCCTCAAGGAGAAGATTGCAAGTCTAGAATCAGAGAATGAAAATCTTCGGAGCCGGCCACCAGCTGCTATGGTGCAAAAGGTTTGTCCAGAAAAAGTAGAAAAAGAAGAACATCGGGAAACTGTTATTACAGAGAAAATTCAACAGAATGCTATTTCAGATACAATAACTTCACAAGTCAAGGAACCAAGACAATCAGTCTCCTTCCTCATAAGACAAAGATCGCTCACAGACAGGCAACAGGAAAGTCATGATGCACTGCTCAAGTGTCTTGCAGAGGATAAGAGATTTGAGAAAAACAGACCAGTTGCAGCTTGTGTTATCTATAAAGCGCTTCTTCAATGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTATTCATACAATCCGATCATCTATTGAGGGCTTGCTTTCATCCTCCATGGGCATGGGGGTTTCAAGTGGCTACAGTGGAATGGTGGGAAAGCCAAATGAGCAATCAAAAGTGGAAGCAAAGTATCCAGCTATTCTATTCAAGCAACATCTAACTGCATATGTTGAGAAGATCTATGGAATGATCCGTGACAGTTTAAAGAAAGAGATCAGTCCATTCCTAAATTTGTGCATTCAGGCACCAAGATCTATGAGGACTAAATCGGTACGAGGATCATCGAGGAACATCCACTCAAATATAGTGGCAAAACAACAGGCATCAAATATGCACTGGAAAAGCATTGTCAATAAGTTAGACCATACCTTGGGCATATTGTCTGACAACTATGTTCCTTCCATGATTACAAGGAAGATCTTTAGTCAGGTGTTCTCTTTCATGAATGTCCAGCTTTTCAATAGTTTATTGCTTCGTCGCGAGTGCTGCTCCTTTAGCAATGGAGAGTATTTAAAGGCAGGTTTGCATGAGTTGGAACAATGGTGTATCAAGGCAACTGATCAGTTTGCTGGATCTTCTTGGGATGAACTCAAACACATACGCCAAGCTGTAGGCTTTCTGGTCTCGCATCAAAAGACTCAAAAATCTTCGGATGAGATAACAAGTGAATTATGTCAGGAGTTAAGTATCCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAATATGGAACGCAGGGCTTATCTCAAGAAGTAATTAGCAGAATGAGAGGGCTTGTGGCAGAAGACTCCATAAACATACCCAATAACTCCTTCCTTCTGGAGGTGGATTCCAGTATACCTTTCTCAATGGAGGAGATGTTCCGTTCCATGACTGACATCCGCTTATCGGACATCGATGTGGATCCACCCACAATCCTAAGACAAAGATCCGACTTCCAATTCTTATTGCAGCAAGTGGATGGCGAGTCTCATTGA 3465 0.4208 MLSSPSLLGLGLFTDAFFFFLLPCFQGTPVNIIVGSHVWVEDPEIAWTDGEVTAINGSDATILTTHGKTIVASVSSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLSIRFSLNEIYVLEDVKKYKLGDPRKFHYLNQSNYYEVANVDDAKEYLETRNAMDIVGISQDEQDAIFRVVSAILHLGNIDFIKGNEVDSSKVKDEKSIFHLHTVAELLMCDEKALEDSLCKRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINNNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTYKAHKRFSKPKLARTDFTINHYAGDGVLEAIRISCAGYPTKRTYDEFLDRFGMLAPDVLDGSDEKTACVAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLARAARCIQRQIRTHLTRKEFLTLRKGTIHIQKLWRGLRAMAARNEFRYRRRTKAAIEVQTQWRSFDAFSAYKKLKKATISLQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHLRIDLEEAKGQEIAKLQNALQEMQSQLDEAHVAIIHEKEAAKLAIESAPPVIKEVPVVDNTKLELLTSKNVELESEVQELKKNIEEFEVRCSDMEKESQERMKKAEEAHLKATQLQETIERLESNLSNLESENQVLRQQALVESKNEELSEELKTLKEKIASLESENENLRSRPPAAMVQKVCPEKVEKEEHRETVITEKIQQNAISDTITSQVKEPRQSVSFLIRQRSLTDRQQESHDALLKCLAEDKRFEKNRPVAACVIYKALLQWRSFEAEKTHIFDKIIHTIRSSIEGLLSSSMGMGVSSGYSGMVGKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSMRTKSVRGSSRNIHSNIVAKQQASNMHWKSIVNKLDHTLGILSDNYVPSMITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELEQWCIKATDQFAGSSWDELKHIRQAVGFLVSHQKTQKSSDEITSELCQELSIPQIYRIGTMFWDDKYGTQGLSQEVISRMRGLVAEDSINIPNNSFLLEVDSSIPFSMEEMFRSMTDIRLSDIDVDPPTILRQRSDFQFLLQQVDGESH 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0399 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 457 IPR027417 -
Lele09g0399 1154 Gene3D Kinesin motor domain 37 118 IPR036961 -
Lele09g0399 1154 ProSiteProfiles IQ motif profile. 417 444 IPR000048 GO:0005515
Lele09g0399 1154 ProSiteProfiles Myosin motor domain profile. 1 339 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 SMART DIL_2 966 1073 IPR002710 -
Lele09g0399 1154 SMART iq_5 439 464 IPR000048 GO:0005515
Lele09g0399 1154 SMART iq_5 490 512 IPR000048 GO:0005515
Lele09g0399 1154 SMART iq_5 416 438 IPR000048 GO:0005515
Lele09g0399 1154 SMART iq_5 467 489 IPR000048 GO:0005515
Lele09g0399 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 457 524 IPR027417 -
Lele09g0399 1154 ProSiteProfiles Dilute domain profile. 828 1091 IPR002710 -
Lele09g0399 1154 Pfam Myosin N-terminal SH3-like domain 34 74 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 Gene3D - 471 519 - -
Lele09g0399 1154 Gene3D - 415 470 - -
Lele09g0399 1154 Coils Coil 652 720 - -
Lele09g0399 1154 ProSiteProfiles Myosin motor domain profile. 340 414 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 Gene3D Myosin VI head, motor domain, U50 subdomain 166 276 - -
Lele09g0399 1154 Pfam IQ calmodulin-binding motif 493 512 IPR000048 GO:0005515
Lele09g0399 1154 Pfam IQ calmodulin-binding motif 419 437 IPR000048 GO:0005515
Lele09g0399 1154 Pfam DIL domain 967 1070 IPR002710 -
Lele09g0399 1154 PANTHER MYOSIN 79 117 - -
Lele09g0399 1154 Gene3D - 119 164 - -
Lele09g0399 1154 ProSiteProfiles IQ motif profile. 491 520 IPR000048 GO:0005515
Lele09g0399 1154 CDD MyosinXI_CBD 779 1114 IPR037975 GO:0007015
Lele09g0399 1154 ProSiteProfiles IQ motif profile. 468 497 IPR000048 GO:0005515
Lele09g0399 1154 Gene3D - 350 412 - -
Lele09g0399 1154 Gene3D - 277 337 - -
Lele09g0399 1154 Coils Coil 610 644 - -
Lele09g0399 1154 SMART MYSc_2a 81 415 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 Coils Coil 514 548 - -
Lele09g0399 1154 Pfam Myosin head (motor domain) 121 273 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 Pfam Myosin head (motor domain) 338 402 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 33 82 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele09g0399 1154 Coils Coil 553 580 - -
Lele09g0399 1154 FunFam Myosin 2 166 284 - -
Lele09g0399 1154 FunFam unconventional myosin-Va 470 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0399 Lele-ChrLele09 2784182 2794760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0399 264 342 Myosins gene family AT2G31900 78.481 1.11e-33 139