Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0381 ATGGAGCTTGGTTTGAGCTTGGGAGATCACGCTTCAAAGCCTTCTGAAGCTTCCAGCCTTCTGGGATTAGGCTTCAGTACCACTTTATCCATTGGTTCTTTCCGTACCAAAGCATCAAATCAACAACAACAAGAAGAAGAACCAGCAGAAAGAGAAGCAAAAAAGCAAAAGGGAAAAGAGAGTATTGAAGATCACGAAGATAGAGTTGAATATGTTCAGCTTGATCTTCTTCCTCACACTCCGGTCGCTGTTTCTCGCACTAACCCACCTTCGCAAATCTCATTTCCATGGCCTCCTCCTGAAAATGGCAGTTCTTCTAGGGGCATGGATATGAATAGATTGCCGCCGCCGCCGCTGCCAGCGGCGGAGGAAGATGAGGCGGCGATGTCGTCATCTCCGAACAGCGCTGCATCGTCGTTTCAGATGGATCTCAGTGTCTTTAACAGAGGAGGGAGCAGTATTAGTGGTTGTAAGAGGGATTATGAGGGAGAGTTATATTATGATCAAAGGGCTGCTTCTTCAAGAGCAAGCGATGAAGACGACAACGTTGGTAGTACGAGGAAGAAGCTAAGGCTGTCCAAGGAACAATCTGCTTTTCTCGAAGAGAGCTTCAAAGAACACAGCACCCTTAACCCAAAACAGAAACTTGCTCTTGCAAAACAGCTCAATCTTCGCCCTCGCCAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAGGTAGATTGTGAGTACTTGAAGAGGTGTTATGAGACATTAACTGAAGAGAACAGAAGGCTTCACAAAGAGCTTCAAGAACTGAGAGCTTTGAAGGCTAATTCAAACCCATTCTTCATGCAATTACCAGCCACCACCTTGACCATGTGTCCCTCTTGTGAGCGAGTCGCCACCAACAATTCCTCCACACCCACCACCATCGCCGCCGCAACAACGGTTGCTACTTCCTCTGCTAGTCCATCTGCGACCAAAATCACTGAAACAAGAACCGCCACTGAACCGGCCTCATCCAAAGGCATTGGATTCCCTCTAAGCAAACCAAAGTTCTATCCTTTTGCTCACACCAAAACCCACCATAACCATCCCAACCCATCTACACCGTCTTGA 1122 0.4733 MELGLSLGDHASKPSEASSLLGLGFSTTLSIGSFRTKASNQQQQEEEPAEREAKKQKGKESIEDHEDRVEYVQLDLLPHTPVAVSRTNPPSQISFPWPPPENGSSSRGMDMNRLPPPPLPAAEEDEAAMSSSPNSAASSFQMDLSVFNRGGSSISGCKRDYEGELYYDQRAASSRASDEDDNVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCYETLTEENRRLHKELQELRALKANSNPFFMQLPATTLTMCPSCERVATNNSSTPTTIAAATTVATSSASPSATKITETRTATEPASSKGIGFPLSKPKFYPFAHTKTHHNHPNPSTPS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0381 373 Coils Coil 256 279 - -
Lele09g0381 373 Pfam HD-ZIP protein N terminus 99 140 IPR006712 GO:0005634
Lele09g0381 373 Pfam Homeobox associated leucine zipper 243 277 IPR003106 GO:0006355|GO:0043565
Lele09g0381 373 Gene3D - 191 241 - -
Lele09g0381 373 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 27 324 - -
Lele09g0381 373 MobiDBLite consensus disorder prediction 173 190 - -
Lele09g0381 373 ProSitePatterns 'Homeobox' domain signature. 218 241 IPR017970 GO:0000981|GO:0006355
Lele09g0381 373 MobiDBLite consensus disorder prediction 1 20 - -
Lele09g0381 373 MobiDBLite consensus disorder prediction 171 190 - -
Lele09g0381 373 CDD homeodomain 187 244 IPR001356 GO:0003677
Lele09g0381 373 Pfam Homeodomain 187 241 IPR001356 GO:0003677
Lele09g0381 373 MobiDBLite consensus disorder prediction 44 73 - -
Lele09g0381 373 MobiDBLite consensus disorder prediction 324 340 - -
Lele09g0381 373 SUPERFAMILY Homeodomain-like 173 244 IPR009057 -
Lele09g0381 373 SMART halz 243 287 IPR003106 GO:0006355|GO:0043565
Lele09g0381 373 FunFam Homeobox-leucine zipper protein 18 172 248 - -
Lele09g0381 373 ProSiteProfiles 'Homeobox' domain profile. 183 243 IPR001356 GO:0003677
Lele09g0381 373 MobiDBLite consensus disorder prediction 34 136 - -
Lele09g0381 373 MobiDBLite consensus disorder prediction 324 347 - -
Lele09g0381 373 SMART HOX_1 185 247 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0381 Lele-ChrLele09 2660340 2661759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0381 170 359 Homeobox Transcription Factor Family AT4G37790 58.031 3.43e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele09g0381 Homeodomain 1.8e-15 CL0123