Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0377 ATGGAAAACCACCCCAGAAGCCCTGACACTAATCCACTCCACCACGAGTGGGGGACGTTGGAGGAGCTCTTGCTTGCCCACGCCGTCCAGCGTCATGGCTTTAAGGATTGGGATGCCGTCGCCCTGGAGGTTCAGACCCGAACCACCCTCCCCAACCTCCTCGTTACCCCCCATCACTGCCGTCAGAAATTCCTTGATCTCAGACGCCGATTCGCCGCCCACCGCGACGACGCCGTCCCCGACAACGTCACCGCCGGGGACGACGTCGATCATGTTCCCTGGCTTGACGAATTGAGGAAGCTACGCGTCGCTGAACTCCAGGCAGCCGTCCAGCGTTCCGACCTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGGGAAGAGTTTGAAGGAAAACGACGGAGAAGAGGGAGAAAAACCGGATCTGGCCGGCTCCGGCGACCTGAAACCGCAAAACGACAAAAAAGGCGGACCTGAAAAGGTTCCTGAGCCGGCAAGTGCCGAACCGGCAACGCGGCTCGACGAGGATCATAATATTAAGCAACCGACAAGTGACGAATCTGACCGGGACAACCAGTCCGTGAACGAGTCTAACTCGACGGTTTCCGTTGGGAAAACCGGGGAGGGAGAAATTAAACTAGAACCGAACCCGGTCCATACCGGCCCGAATGAACCGGATGCGGTCGAGAGGAAGCCCAATCCGCTCGGAGAAGAATCTAATAACGGAAGCTACGATGCGGCGGCGAAGGTGCCAACGGGGGATTCACTTCCCCCGAGCGAGGAGAGGAAGGTGGAGGACTCGTCTGAGTTGCGAGACTCGGTGACGCACTCGAGGGGTGGTGGTGGCGAGGGAGGGACGAAGGAGAGCAGTGATGTGCAGAGCTCGGCGAGTTTGACGAAGAAAAGAAAGCCGAGGCGGAGGAAGGAGGAGGAGGAGCCGCTGGAGAACGACGAGGTGGCCGTGAAAGTTGAGCCGTTGAATGGGATGTTGGATTTAATCAAAGGTCACGATCACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGGAAGTAAAAGAATACAAGAACATAGTACGACAGCCAATGGATTATGAAACCATACAGCGGCGACTACGAAACGGGACTTATTCCCGCTGCACTCATGCTTTCTTCCGTGATCTCCTCCTCCTCTTCACCAACGCCGCCGCTGTCTTCCCCAAAGACTCCGCCGAATCATGCGCCGCACATCAGTTGGGCCACCTTGTCTCCGCTGAGATTGCACACCACATTCCGGTGATCCGACAGGAGCCACTCCCACCCAACCCATCATCGTCATCAAAACCAAACCCTGATTCACTTTTGTCAAAACACAAAGCTTCTTCTCCTATTTTGGTCTGCAGGAAACGCAGTGCATTCTCAGCTAAACCTTCTACTTCCTCCGCTACCTTTGGCCAAAAGGGTGACTTAGCGGGTCATGAGAAGAAGAAGCCAGCTTCAGATACAAAACCACCCCCCTTGAAGCCATCTTCTTCTGATACAGATGATGAACCTCCCACGAAAAAGGAAAAGCCGATCACCAGAGTAAGAAGCCTGAGAAGAAGTAACAAAAACCTCACCAGCAACTCCACCAAGAAGGCAGGCACGGCCAGCAAGCCACCAGAACCGCCGAAACCAGATAAGAGCAAAGCAGAGGCTTCTGCAGGAACAGATAAAAAGAAGAGCGCCGCAGCGGATTTCTTAAAAAGGATAAAGCGAAGTGCTCCGGCGGAATCATTGAGAAGTAGTGGTGGCAATAGCGGTGGTAATAGTAGCAAAGGTGGGGGAAGTAGTGGGAAAGATCAGAAGAAGATGACAAGTGGTGGCAAAGGGGACAAAGGGAAAGAAAAAGGGACCAAGCACGTGGGTGGCAGTAGCATCTCCGGCGACAAAAAGAATGAGAACGAGAATAGTAGTCAATCGAAGAGGAGTGTAGGGAGGCCCCCAAAGAAGGTGGCAGAAAGTAGTAATATTTCTGCAAAGCGTGGGAGGGAAAGTGGTGGAAAGGATAAGAGGCCCAAGAAGCGATCTAAGAGCTTGAATATTATTCCTTTGTATCTTGATATTGTTCAAATCACAACTAATCCTATAAGCGCATCAATAACAATATCGATGCAAAGTATTCCTACACACATATCAACTCGTATTACAAGAGCTTGA 2172 0.5267 MENHPRSPDTNPLHHEWGTLEELLLAHAVQRHGFKDWDAVALEVQTRTTLPNLLVTPHHCRQKFLDLRRRFAAHRDDAVPDNVTAGDDVDHVPWLDELRKLRVAELQAAVQRSDLKVKKLEEERGKSLKENDGEEGEKPDLAGSGDLKPQNDKKGGPEKVPEPASAEPATRLDEDHNIKQPTSDESDRDNQSVNESNSTVSVGKTGEGEIKLEPNPVHTGPNEPDAVERKPNPLGEESNNGSYDAAAKVPTGDSLPPSEERKVEDSSELRDSVTHSRGGGGEGGTKESSDVQSSASLTKKRKPRRRKEEEEPLENDEVAVKVEPLNGMLDLIKGHDHSSLFERRLESQEVKEYKNIVRQPMDYETIQRRLRNGTYSRCTHAFFRDLLLLFTNAAAVFPKDSAESCAAHQLGHLVSAEIAHHIPVIRQEPLPPNPSSSSKPNPDSLLSKHKASSPILVCRKRSAFSAKPSTSSATFGQKGDLAGHEKKKPASDTKPPPLKPSSSDTDDEPPTKKEKPITRVRSLRRSNKNLTSNSTKKAGTASKPPEPPKPDKSKAEASAGTDKKKSAAADFLKRIKRSAPAESLRSSGGNSGGNSSKGGGSSGKDQKKMTSGGKGDKGKEKGTKHVGGSSISGDKKNENENSSQSKRSVGRPPKKVAESSNISAKRGRESGGKDKRPKKRSKSLNIIPLYLDIVQITTNPISASITISMQSIPTHISTRITRA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0377 723 MobiDBLite consensus disorder prediction 426 452 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 125 142 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 630 649 - -
Lele09g0377 723 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lele09g0377 723 CDD SANT 16 48 IPR001005 -
Lele09g0377 723 SUPERFAMILY Bromodomain 325 434 IPR036427 GO:0005515
Lele09g0377 723 ProSiteProfiles Bromodomain profile. 333 404 IPR001487 GO:0005515
Lele09g0377 723 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 13 682 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 255 272 - -
Lele09g0377 723 CDD Bromodomain 325 418 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 609 624 - -
Lele09g0377 723 Gene3D - 8 66 - -
Lele09g0377 723 SMART bromo_6 114 423 IPR001487 GO:0005515
Lele09g0377 723 MobiDBLite consensus disorder prediction 168 191 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 523 540 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 125 317 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 505 521 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 303 317 - -
Lele09g0377 723 SUPERFAMILY Homeodomain-like 13 67 IPR009057 -
Lele09g0377 723 Coils Coil 103 137 - -
Lele09g0377 723 Gene3D - 314 422 IPR036427 GO:0005515
Lele09g0377 723 Pfam Bromodomain 328 403 IPR001487 GO:0005515
Lele09g0377 723 MobiDBLite consensus disorder prediction 583 608 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 547 580 - -
Lele09g0377 723 MobiDBLite consensus disorder prediction 467 682 - -
Lele09g0377 723 ProSiteProfiles SANT domain profile. 16 72 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0377 Lele-ChrLele09 2630485 2633667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele09g0377 Bromodomain 1.6e-12 No_clan