Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0374 ATGCAAGAACTACCCAATACATTTTGGCCTAGTTCTTCAAATTTTGAACAATTGCAGGGACTAAATGAAGATGACTGTAGCAAATCTTGCCTCTATGATTGTTACTGTGTGGTTGCTTTTATAAAGGAAGGAACATGTGGGAAGAAGAAATTGCCTCTTTCAAACGGAAGACGACATTGGGATGTCAATGGGAAGGCCCTGATAAAATTGACCAAATTTGATGTTCCTTCATATGATGAATCCCTTTCAGAGGATAATAGAAACACAAGGAAGAAGGACCAAGCAACCTTGATTTTAGCTGGAGCACTTCTATTAGACCTAGAAGAAGCCACAGATGGATTCAAAGAAGAATTAGGAAGAGGTGCTTTTGGTACTGTGTATAAAGGGGTTATATTCTCATCAAGTTCAAGAACCTATGTTGCTGTGAAGAAGCTGGATAAGCTTCACCTTGAGGGAGAAAAGGAATTCAAAACAGAAGTAAGCATAATAGCAAAAACCCATCACAAGAACCTAGTTAGACTTCTGGGTTTCTGTGATGAAGGGCCAAACAAGCTCTTGGTGTCTGAGTTCATGAGCAATGGAACAGTAGCTAGCTTCCTCTTTGGGATCTCAAGACCTGACTGGAACAAAAGAATCCAAATTGCATCTGGGGTTACAAGAGGGATCATGAAAAGCCTTGATATGGAGAAAAAGAATGAAGAGGAAGTGATTTTGATTGACTGGGTTTATGACTGCTATAAAGCAAGAAGATTAAGCAAACTTGTGGAGGAAGATGAAGAAGCTAGAAATGATATGAAGAGATTAGAGAGATTAGTGATGGTGGCTCTTTGAAGGACTGGGATAACAGAATGTGACTATTGA 861 0.3937 MQELPNTFWPSSSNFEQLQGLNEDDCSKSCLYDCYCVVAFIKEGTCGKKKLPLSNGRRHWDVNGKALIKLTKFDVPSYDESLSEDNRNTRKKDQATLILAGALLLDLEEATDGFKEELGRGAFGTVYKGVIFSSSSRTYVAVKKLDKLHLEGEKEFKTEVSIIAKTHHKNLVRLLGFCDEGPNKLLVSEFMSNGTVASFLFGISRPDWNKRIQIASGVTRGIMKSLDMEKKNEEEVILIDWVYDCYKARRLSKLVEEDEEARNDMKRLERLVMVALXRTGITECDY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0374 286 Coils Coil 248 271 - -
Lele09g0374 286 ProSiteProfiles Protein kinase domain profile. 112 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele09g0374 286 SUPERFAMILY Protein kinase-like (PK-like) 108 222 IPR011009 -
Lele09g0374 286 Pfam Protein tyrosine and serine/threonine kinase 114 222 IPR001245 GO:0004672|GO:0006468
Lele09g0374 286 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 224 276 - -
Lele09g0374 286 Gene3D Phosphorylase Kinase; domain 1 78 190 - -
Lele09g0374 286 ProSitePatterns Protein kinases ATP-binding region signature. 118 144 IPR017441 GO:0005524
Lele09g0374 286 FunFam S-receptor-like serine/threonine-protein kinase 84 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0374 Lele-ChrLele09 2620923 2623176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0374 107 223 Receptor kinase-like Gene Family AT4G23220 47.541 7.64e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele09g0374 PK_Tyr_Ser-Thr 1.3e-18 CL0016