Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0359 ATGTTCATGTTCATGTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCGTCATGGAGGGTTGAATTGAAATATATGAGTAAAGAACTGTTACAGCAACGCAGAAATTCGGTTTCTTCAAAGAGAGACATTCTGGGACCTCGTTATATATTTTCTAACCAGAGGAAGGAGGAAGCGGCTGAAGCAGTAGCAATGGCTCCCAAGCAGAGAACACCAAAGGTCAGCAGAAATCCTGAATTGATTAGAGGGATTGGAAAGTATTCGAGGTCGAAAATGTACCACAAGAGAGGTCTCTGGGCTATCAAGGCAAAAAATGGGGGTGTTTTCCCTCGTCACGATGCCAAGCCCAAGCCCGAAGCTCCTGCGGAGAAACCTCCCAAGTTTTATCCCGCCGACGATGTCAAGAAGCCCTTGGTAAACCGGCACAAGCCGAAGCCTACTAAACTCAGGTCTAGCATTACTCCCGGTACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTGGTTTTCCTGAAGCAGCTTCCTTCTGGGTTGCTCCTTGTTACTGGTCCATTTAAGATTAATGGAGTTCCTTTGAGACGTGTTAGCCAGTCTTATGTGATCGGCACCTCCACAAAGGTTGATATTTCTGAAGTCAATGTTGAGAAATTTGACGACAAGTACTTTGCCAAGAAGACTGAGAAGAAGAAGAAGAAGGGAGAAGGAGAGTTTTTTGAGGCTGAGAAAGAGGAGAAAAATGTGATCCCCCAAGAGAAAAAGGATGACCAGAAAACCGTGGATTCTGTTTTGTTAAAAGCCATTGAGAGCGTCCCAGAATTGAAGGCTTATTTGGGTGCAAGGTTCTCTCTCAAGGCTGGCATGAAGCCTCATGAACTAGTCTTCTAA 924 0.447 MFMFMFFSSSSSSSSSSSSSSSSPPPPSWRVELKYMSKELLQQRRNSVSSKRDILGPRYIFSNQRKEEAAEAVAMAPKQRTPKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPPKFYPADDVKKPLVNRHKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDISEVNVEKFDDKYFAKKTEKKKKKGEGEFFEAEKEEKNVIPQEKKDDQKTVDSVLLKAIESVPELKAYLGARFSLKAGMKPHELVF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0359 307 MobiDBLite consensus disorder prediction 1 29 - -
Lele09g0359 307 Pfam Ribosomal protein L6, N-terminal domain 77 135 IPR005568 GO:0003735|GO:0005840|GO:0006412
Lele09g0359 307 MobiDBLite consensus disorder prediction 119 160 - -
Lele09g0359 307 CDD KOW_RPL6 155 307 IPR041997 -
Lele09g0359 307 FunFam 60S ribosomal protein L6 161 245 - -
Lele09g0359 307 Pfam Ribosomal protein L6e 200 307 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele09g0359 307 SUPERFAMILY Translation proteins SH3-like domain 160 250 IPR008991 -
Lele09g0359 307 MobiDBLite consensus disorder prediction 119 150 - -
Lele09g0359 307 Gene3D - 161 245 IPR014722 -
Lele09g0359 307 PANTHER 60S RIBOSOMAL PROTEIN L6 77 307 IPR000915 GO:0003735|GO:0005840|GO:0006412
Lele09g0359 307 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0359 Lele-ChrLele09 2545763 2548915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0359 75 307 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.691 6.64e-127 360