Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0357 ATGGTTCGCTCCAATGGCGCAAGGCTGATTCGATGGGCTGCTTGTCGATCTCTTGCCTCAAACTACCTTCGTGAAGCAGCGAACAACATACACGAGGCAGTGTCCCAAAGAGGTTATAAGACATTGAATTCAGGGGTTTGCAGGCCATCTAGGATTATTGGAAGTTACACTTCGAATGTTGGAGATGCTGTTACTATGAAGAACCGGTTACTGTTGGGAGCGATGAATACATATTGGGGCACAACTAGATCCATTCATGGCACGGCTTCGTTGGCAAGAGATTATTATGATGTTCTTGGTGTGAATAAGAATGCAAGCGCATCTGAAATAAAGAAAGCATATTATGGGCTTGCAAAGAGGCTCCATCCTGACACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCGATGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGGCAACAATATGATCAGGTTGGCCATAATGCCTATGTAAATCAACAAAGCAATGGTTTTGGAGGAGATGCTGGCTTTAATCCATTTGAGCAGATATTCCGTAATCATGTAATGACTTACCTTCCATCTCTTGCTATCTTGTCTGATTTTGTAAAGGACTTTTTTCATCAAAATGTTGGTGGAGAGGACGTCAAGACCTTTGTTGAACTATCATTTATGGAAGCTGTTCAAGGATGCACCAAAACTGTGTCATTTCAGACTGATGTGCTTTGTAATGCCTGTGGTGGTAGTGGCGTTCCTCCTGGAACAAGACCTGAAACTTGCAAACGCTGTAAAGGGTCTGGTGTGAATTATGTGCAAGCTGGCATATTCAGGATGGAGAGTAACTGCACCGCATGCAAGGGAACTGGAAAAATTGTATCGAGCTTCTGCAAGTCTTGCAGGGGTGCAAAGGTTGTCAAAGGAACAAAGTCAGTCAAGTTGGATTTCACGCCTGGGATAGACAACAATGAGACTATAAAAGTTTATAGAAGTGGTGGAGCAGACCCTGATGGAGATCACCCAGGTGATCTTTACGTGATTGTCAGGGTTAGAGAAGACCCTGTTTTCCGAAGAGAAGGATCTGATATTCATGTGGATGCTGTCTTAAGCATTACTCAGGCAATTTTGGGTGGAACCATTCAGGTCCTCACTCTTACAGGAGATGTTGTTCTCAAGGTTCGTCCTGGCACCCAACCCGGTCAGAAGGTGGTATTGAAAAAGAAAGGGATCAAAACCAAAAATTCGTGGTCGTTTGGGGATCAATATGTTCATTTTAATGTCAGCATCCCAACAAACCTGACGCAGAGACAGCGTGAATTAATCGAGGAGTTTGCCAAGGAAGAGCAAGGGGAAGATGTTAAACAAAGAGCTGCTTCAGGTTCTGGATGA 1383 0.4367 MVRSNGARLIRWAACRSLASNYLREAANNIHEAVSQRGYKTLNSGVCRPSRIIGSYTSNVGDAVTMKNRLLLGAMNTYWGTTRSIHGTASLARDYYDVLGVNKNASASEIKKAYYGLAKRLHPDTNKDDPEAEKKFQEVSMAYEVLKDEEKRQQYDQVGHNAYVNQQSNGFGGDAGFNPFEQIFRNHVMTYLPSLAILSDFVKDFFHQNVGGEDVKTFVELSFMEAVQGCTKTVSFQTDVLCNACGGSGVPPGTRPETCKRCKGSGVNYVQAGIFRMESNCTACKGTGKIVSSFCKSCRGAKVVKGTKSVKLDFTPGIDNNETIKVYRSGGADPDGDHPGDLYVIVRVREDPVFRREGSDIHVDAVLSITQAILGGTIQVLTLTGDVVLKVRPGTQPGQKVVLKKKGIKTKNSWSFGDQYVHFNVSIPTNLTQRQRELIEEFAKEEQGEDVKQRAASGSG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0357 460 Gene3D - 242 302 - -
Lele09g0357 460 Hamap Chaperone protein DnaJ [dnaJ]. 91 454 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele09g0357 460 CDD DnaJ 94 148 IPR001623 -
Lele09g0357 460 ProSiteProfiles Zinc finger CR-type profile. 229 307 IPR001305 GO:0031072|GO:0051082
Lele09g0357 460 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 229 305 IPR036410 -
Lele09g0357 460 Pfam DnaJ domain 94 156 IPR001623 -
Lele09g0357 460 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 50 453 - -
Lele09g0357 460 SUPERFAMILY Chaperone J-domain 93 185 IPR036869 -
Lele09g0357 460 Gene3D - 349 457 - -
Lele09g0357 460 Gene3D DnaJ domain 91 213 IPR036869 -
Lele09g0357 460 CDD DnaJ_C 213 431 - -
Lele09g0357 460 SUPERFAMILY HSP40/DnaJ peptide-binding domain 353 439 IPR008971 GO:0006457|GO:0051082
Lele09g0357 460 Pfam DnaJ central domain 242 302 IPR001305 GO:0031072|GO:0051082
Lele09g0357 460 SMART dnaj_3 93 151 IPR001623 -
Lele09g0357 460 FunFam Molecular chaperone DnaJ 234 307 - -
Lele09g0357 460 SUPERFAMILY HSP40/DnaJ peptide-binding domain 214 349 IPR008971 GO:0006457|GO:0051082
Lele09g0357 460 Pfam DnaJ C terminal domain 218 428 IPR002939 -
Lele09g0357 460 ProSitePatterns Nt-dnaJ domain signature. 136 155 IPR018253 -
Lele09g0357 460 CDD DnaJ_zf 242 302 IPR001305 GO:0031072|GO:0051082
Lele09g0357 460 FunFam Chaperone protein dnaJ GFA2, mitochondrial 91 214 - -
Lele09g0357 460 PRINTS DnaJ domain signature 114 129 IPR001623 -
Lele09g0357 460 PRINTS DnaJ domain signature 131 151 IPR001623 -
Lele09g0357 460 PRINTS DnaJ domain signature 151 170 IPR001623 -
Lele09g0357 460 PRINTS DnaJ domain signature 96 114 IPR001623 -
Lele09g0357 460 FunFam Chaperone protein dnaJ 1, mitochondrial 349 455 - -
Lele09g0357 460 ProSiteProfiles dnaJ domain profile. 94 159 IPR001623 -
Lele09g0357 460 Gene3D - 214 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0357 Lele-ChrLele09 2535300 2540137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0357 94 158 Miscellaneous Gene Families AT1G16680 38.806 1.50e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0357 09 2535300 2540137 Lele09g0357 09 2535300 2540137 ECH
Lele09g0357 09 2535300 2540137 Lele11g0355 11 3545193 3550159 hybridization
Lele09g0357 09 2535300 2540137 Lele12g0941 12 17163777 17168772 hybridization